Gene PsycPRwf_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1290 
Symbol 
ID5205171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1586560 
End bp1587384 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content45% 
IMG OID640599509 
Producthypothetical protein 
Protein accessionYP_001280186 
Protein GI148653093 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACAACTC CTTTATTATT AGCAGCATTT GCTATGGGCT TTTTTGGTTC ACCACATTGT 
TTGGGTATGT GTGGTGGCTT GGTTACCGCT TTTGGCCTAT CTATGCAAGA AGTAAGCCCA
CTAAAGAAAA GAGGGCTTAT TGCTACTTAT CACTTTGGTC GCCTGGTTAG TTACTCAATT
CTAGGGGTTA TTGCAGGTAT TGTGGGCACC ACGGTCTTAG CCCCACTATT AATGGGTAAC
TCAACCCCGC GTATTTTACT GGGTCTGGTA TTGGTATTCA TTGGCCTATC TATGCTGGGC
ATGCCTTTTT TAAATAAGCT TGAAAAAGTG GGCATGGGCG TTTGGAAAAA ACTCTCCCCT
TTACGTCAAA AAGTTTTCCC AATAACTACC TTCCCAAGGG CTTTAGCAGC GGGTTTATTA
TGGGGCTTTT TACCTTGTGG CTTGGTCTAT GGCGCTCTAC TGATGGCCGT TGTCGGCAAT
AACATCGCAA CTGGGGCTTT ATTAATGTTT GTCTTTGGCT TAGGCACGGT TCCCATGTTG
GTCGCTACCC AAGAGACTGT GGGCTGGCTA CACAAACAAA TTGGCCGCTA TAAATTACGT
CAATTAAATG GCGTCGTAAT GATTTTGTCA GGACTGGCAG TAATTGCCCT GCCTATAGCC
ATGCATAGCA TGGGTGGACA CGGCGATCAC GGCTCGCATG GCGCACATCA AATGCATGAT
GATTCAGCGA TGATTTCTAC TACGCACGAC CACTCTCAAG ATATGCACGG TTCTAATACT
GAAGAGCATC ATAACCATGA TCACTCACAT GCTAACCATC AGTAA
 
Protein sequence
MTTPLLLAAF AMGFFGSPHC LGMCGGLVTA FGLSMQEVSP LKKRGLIATY HFGRLVSYSI 
LGVIAGIVGT TVLAPLLMGN STPRILLGLV LVFIGLSMLG MPFLNKLEKV GMGVWKKLSP
LRQKVFPITT FPRALAAGLL WGFLPCGLVY GALLMAVVGN NIATGALLMF VFGLGTVPML
VATQETVGWL HKQIGRYKLR QLNGVVMILS GLAVIALPIA MHSMGGHGDH GSHGAHQMHD
DSAMISTTHD HSQDMHGSNT EEHHNHDHSH ANHQ