| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1249 |
|---|
| Symbol | |
|---|
| ID | 5205614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 1537631 |
|---|
| End bp | 1538734 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640599468 |
|---|
| Product | histidinol-phosphate aminotransferase |
|---|
| Protein accession | YP_001280146 |
|---|
| Protein GI | 148653053 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.109002 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0431111 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAA AGACATTTGC AACCCCAGCT TACGCCAGCA TAGCCACCCT AAGCGCTTAT
CAATCGAGTA GGTCTGTGGA GGAGCTCAAA CGTGAGTATG AGGTAAATGA TGTCTTAAAG
CTTGCCAGCA ACGAGAACCC GCTAGGGTGC TCGCCTTACG TAACCTTGGC CATCACTGAG
CAGCTGGGGC AATTGGCTCG CTACCCAGAT GGCAAAGGGC ATGACCTTAA ACAAGCGATA
GCGTATTTTA ATGAGGTACA CAGTAAGCAG GTCACTTTAG GTAATGGCTC TAACGATTTG
CTCGACTTGA TAGCCCGTAC CTTTGTGGGC CATGAAGATG CCATTATTTA TAGCGAATAT
GCTTTTATTG TGTACGCTAT GCTGGCTAAG ATACTAGGGG CTAAGGGTGT TGAAGTACCC
GCTAAGCGCT ATGGTCATGA TTTACCGGCT ATGCTTGATG CGGTTCAACA TACCCCCAAT
GCGCGCTTGG TATTTATTGC CAATCCTAAC AACCCGACCG GCACCTTGTT AAGCAGTGAA
GAGATACGTG ATTTTGTCGC TCAAGTGCCC TCACATGTGT TGGTGGTGCT AGATGAAGCC
TATGTCGAGT ATAGCCCTGA GAGTAATAAT CGCGCTTTAC TTGAGGATTT TGATAATGTG
ATTATTGTGC GCACTTTCTC TAAAGCTTAT GGGCTGGCAG GTCTACGCGT GGGTTATGCG
TTGAGCCATC CTGAAGTGGC AACTATGCTT GATAGAGTGC GTCAGCCTTT TAATGTGAGT
CTGGTGGCGC AATCAGCTGC TGTGGCGGCC TTGGGCGATC AAGACTTTAT TGCCAAAGTG
CATAAAATCA ATGATGGTCA GATGCGCTGG ATATGCAAGC AATTTGATGC ACTGGGTTTG
GGTTTCGTCA AATCCTATGC CAACTTTGTG ATGGTCAACG TGGGGGATGC TCAAAGTATT
AATCAGGCCT TATTGGAGCA AGGAGTGATT GTGTATCCAC TGACTGCGTA TGGTCTGCCC
GAGTGGCTGC GTATCACTGT GGGAACGCCT GAGGACAATA CAAGATTGAT AGATACCCTG
CGTGATACGT TGCAGTCCCT GTAG
|
|---|
| Protein sequence | MSQKTFATPA YASIATLSAY QSSRSVEELK REYEVNDVLK LASNENPLGC SPYVTLAITE
QLGQLARYPD GKGHDLKQAI AYFNEVHSKQ VTLGNGSNDL LDLIARTFVG HEDAIIYSEY
AFIVYAMLAK ILGAKGVEVP AKRYGHDLPA MLDAVQHTPN ARLVFIANPN NPTGTLLSSE
EIRDFVAQVP SHVLVVLDEA YVEYSPESNN RALLEDFDNV IIVRTFSKAY GLAGLRVGYA
LSHPEVATML DRVRQPFNVS LVAQSAAVAA LGDQDFIAKV HKINDGQMRW ICKQFDALGL
GFVKSYANFV MVNVGDAQSI NQALLEQGVI VYPLTAYGLP EWLRITVGTP EDNTRLIDTL
RDTLQSL
|
|---|
| |