Gene PsycPRwf_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1193 
Symbol 
ID5206151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1458354 
End bp1459619 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content46% 
IMG OID640599413 
Productmanganese transporter NRAMP 
Protein accessionYP_001280092 
Protein GI148652999 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1914] Mn2+ and Fe2+ transporters of the NRAMP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAG TATCCCCTAA TTTAGATCAA AACTCGGATA AATTTAACTG GCGTATCTTC 
GGCCCTGGCA TCTTGCTAGC TACTGGCGCT GTTGGTGGCT CACATCTTAT TTCATCGACA
CAAGCTGGCG CGTTATATGG CTGGCAATTG GCGATTATGA TTATTCTCGC CAACTTTTTT
AAATACCCCT TTTTTAAATT CAGCACCGAC TATGTGTATG ACACAGGGGA GTCACTAATT
GCCGGTTACG CCAAAAAATC GCGGGTATAC CTTTGGTTAT ATACCTTGCT TTTGTTAGCG
TCAGCGCTTA TTAGCGTGGG TGCTGTGGCC TTGTTAACCA CGGTTATTTT GGGCTTTATG
TTGCCCTCAA GTATCAGTCC CTCGATGACG GTACTGTCAT TTATCGTTAT GGGCGTCTCT
TGGCTGTTTT TGGTGTTGGG CCACTACAAG TTGCTCGATA AGTTCAATAA GTGGATTATG
GCCGCTTTAA TTGTCTCAAC CATTGCTGCT GTTATGATTG CAGCGGGTAA GCCGACGGTT
ATGGCACCAG ATTTCATAGC CGCTTCGCCT TGGAATATGG CTTCGCTGGG CTTTATCGTG
GCCTTAATGG GTTGGATGCC GGCACCGCTT GAATTTGCGG CCATGACCTC GATGTGGACC
AAAGAAAAGG TAAAAGCCGA TCACACTACC CACCGCCAAG GTTTAATTGA CTTCAATGCC
GGCTACATCT CAAGTGCCAT TTTGGCGCTG TTTTTCTTAG CGCTTGGGGT CTTTGTACAA
TACGGCACAG GGACCGAGAT TCAAACCCAA GGCGGCGCTT ACATTACTCA ATTAATGAAT
ATGTACACCG CCACCATTGG CGATTGGTCC AAGTTATTGG TGGCGTTTGT GGCCTTTATG
GTGATGTTTG GCACCACCAT TGCCTGTGCC GATGGTTATG GCCGCTCTAT TGCTGAAGGG
ATGCGTTTGA TTAATAACAA TCCAAACGAG GCCTCGCAAA CCCAGATTTT TTGGTGGACC
ACCTTTTCAG CCTTAGGCGG CTTTGTTCTT ATCACCTTTT TCAAAGGTCA GCTTGATATC
ATGCTTAAGT TTGCGATGAT TTCAGCCTTT GTGTTAGCCC CTGTGTATGG CTGGCTCAAC
TATTCATTGA TTAAAAGTCA GCAAAGACTG TCACCGCTTA TGACCTTTTA TAGTATCTCA
GGTCTTATCT TTTTAGCGGG TATCGCTTTA TTGTTTATGG CACAGCTGAC AGGGATTCTT
GCCTAG
 
Protein sequence
MSAVSPNLDQ NSDKFNWRIF GPGILLATGA VGGSHLISST QAGALYGWQL AIMIILANFF 
KYPFFKFSTD YVYDTGESLI AGYAKKSRVY LWLYTLLLLA SALISVGAVA LLTTVILGFM
LPSSISPSMT VLSFIVMGVS WLFLVLGHYK LLDKFNKWIM AALIVSTIAA VMIAAGKPTV
MAPDFIAASP WNMASLGFIV ALMGWMPAPL EFAAMTSMWT KEKVKADHTT HRQGLIDFNA
GYISSAILAL FFLALGVFVQ YGTGTEIQTQ GGAYITQLMN MYTATIGDWS KLLVAFVAFM
VMFGTTIACA DGYGRSIAEG MRLINNNPNE ASQTQIFWWT TFSALGGFVL ITFFKGQLDI
MLKFAMISAF VLAPVYGWLN YSLIKSQQRL SPLMTFYSIS GLIFLAGIAL LFMAQLTGIL
A