Gene PsycPRwf_1150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1150 
Symbol 
ID5206657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1407685 
End bp1408530 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content48% 
IMG OID640599370 
Productextracellular solute-binding protein 
Protein accessionYP_001280049 
Protein GI148652956 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTATC GTGGATTAAG AAATCTAACC GTAATGGCAA CCGGCGCCAT CTTATTGGCC 
GCTTGTAACC AGACCCCATC AACCGATAGC GCCAAAGAGG CAGAGGCGAC ACAATCTACA
GGCACAGACT CTGACTTATT AAGCCGCATC AACAGTGGTG GCACCATCAA CGTAGGGACT
GAGGGCACAT ACCCTCCATA TACCTATCAT GATGAGCAAA ACAAGCTGAC CGGCTATGAT
GTGGAAGTCA CCCGTGCTGT GGCAGATAAG CTTGGCGTAA AAGTTGAGTT TAAAGAGACC
CAGTGGGATG CGATGCTTGC CGGCCTAGAT GCCAAACGCT TTGACATGGT GGCCAACCAA
GTGAGTCTTA CCACCCCTGA GCGTCAAGCC AAGTATGACA AAGCAGAAGC TTACAGCTGG
TCAGGCGCTG TGGTACTTGC CCCAAAATCA GACAGCCGCT TTAACTCTTG GGAGTCTTTA
AAAGGCTTAA AATCAGCGCA GTCACTAAGC AGCAACTATG GCGAGTTGGC CAAAAAATAT
GAAGCCGAAG TGGTGCCTGT AGATGGTATG GCCCAAGCGG TGGAGTTGGT CAAACAAGGC
CGTGCTGATT TTACTTTAAA TGACAATCTA GCCGTGCTTG ATTATCTAAA AAAATTCCCA
GACAGCTCAC TTGAAATTAA GCTAAAAGCC CCTGCTGAGG AAATGACCGG CTCAGGCTTG
GTGATGCTAA AAGGAGATGA TGCGGCACTG GCAAAAATCA ACGAAGCGAT GGATGAGCTA
CATAAAGATG GCACATTAAC CCGATTAAGC GAGCAGTTTT TCGGTGAGGA TATCAGCAAA
AAATGA
 
Protein sequence
MSYRGLRNLT VMATGAILLA ACNQTPSTDS AKEAEATQST GTDSDLLSRI NSGGTINVGT 
EGTYPPYTYH DEQNKLTGYD VEVTRAVADK LGVKVEFKET QWDAMLAGLD AKRFDMVANQ
VSLTTPERQA KYDKAEAYSW SGAVVLAPKS DSRFNSWESL KGLKSAQSLS SNYGELAKKY
EAEVVPVDGM AQAVELVKQG RADFTLNDNL AVLDYLKKFP DSSLEIKLKA PAEEMTGSGL
VMLKGDDAAL AKINEAMDEL HKDGTLTRLS EQFFGEDISK K