Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1150 |
Symbol | |
ID | 5206657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1407685 |
End bp | 1408530 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640599370 |
Product | extracellular solute-binding protein |
Protein accession | YP_001280049 |
Protein GI | 148652956 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTATC GTGGATTAAG AAATCTAACC GTAATGGCAA CCGGCGCCAT CTTATTGGCC GCTTGTAACC AGACCCCATC AACCGATAGC GCCAAAGAGG CAGAGGCGAC ACAATCTACA GGCACAGACT CTGACTTATT AAGCCGCATC AACAGTGGTG GCACCATCAA CGTAGGGACT GAGGGCACAT ACCCTCCATA TACCTATCAT GATGAGCAAA ACAAGCTGAC CGGCTATGAT GTGGAAGTCA CCCGTGCTGT GGCAGATAAG CTTGGCGTAA AAGTTGAGTT TAAAGAGACC CAGTGGGATG CGATGCTTGC CGGCCTAGAT GCCAAACGCT TTGACATGGT GGCCAACCAA GTGAGTCTTA CCACCCCTGA GCGTCAAGCC AAGTATGACA AAGCAGAAGC TTACAGCTGG TCAGGCGCTG TGGTACTTGC CCCAAAATCA GACAGCCGCT TTAACTCTTG GGAGTCTTTA AAAGGCTTAA AATCAGCGCA GTCACTAAGC AGCAACTATG GCGAGTTGGC CAAAAAATAT GAAGCCGAAG TGGTGCCTGT AGATGGTATG GCCCAAGCGG TGGAGTTGGT CAAACAAGGC CGTGCTGATT TTACTTTAAA TGACAATCTA GCCGTGCTTG ATTATCTAAA AAAATTCCCA GACAGCTCAC TTGAAATTAA GCTAAAAGCC CCTGCTGAGG AAATGACCGG CTCAGGCTTG GTGATGCTAA AAGGAGATGA TGCGGCACTG GCAAAAATCA ACGAAGCGAT GGATGAGCTA CATAAAGATG GCACATTAAC CCGATTAAGC GAGCAGTTTT TCGGTGAGGA TATCAGCAAA AAATGA
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Protein sequence | MSYRGLRNLT VMATGAILLA ACNQTPSTDS AKEAEATQST GTDSDLLSRI NSGGTINVGT EGTYPPYTYH DEQNKLTGYD VEVTRAVADK LGVKVEFKET QWDAMLAGLD AKRFDMVANQ VSLTTPERQA KYDKAEAYSW SGAVVLAPKS DSRFNSWESL KGLKSAQSLS SNYGELAKKY EAEVVPVDGM AQAVELVKQG RADFTLNDNL AVLDYLKKFP DSSLEIKLKA PAEEMTGSGL VMLKGDDAAL AKINEAMDEL HKDGTLTRLS EQFFGEDISK K
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