| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1145 |
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| Symbol | |
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| ID | 5206524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1400106 |
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| End bp | 1401554 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640599365 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001280044 |
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| Protein GI | 148652951 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000215918 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAATA ATTCTAATAA TCAAGAAATC ACTAACACCA CCGCCACTTC ATTGGCATCA
GATTTACAGC CCAAATTCAC TTTATCTGCG GTTCAAGCCA AGTTTTTGCC TTATGTTCTT
GCTGTCGCTT TGTTTATGCA AATTTTGGAT GCGACTATCT TAAACACGGC CCTGCCGGAA
ATGGCGCTGG CGTTAGGTGA GTCGCCGCTC AAGATGCAGT GGGCTGTAAT CAGCTATGCA
TTAACTTTAG CCATCTTTAT CCCAATAAGC GGATTTATGG CCGACAAGTA TGGGACTCGC
AAAGTATTCT TAACTGCGAT TGTACTGTTT AGCATTGGCT CAATCTTCTG TGCCATGTCC
CCTAATCTGG ATATCTTGGT CGCCTCTCGC ATACTACAAG GTGTGGGCGG AGCAATGATG
ACACCCGTGG CCCGCTTGAT ATTGGTCAAG TCCTATCCGC GCAACCAGCT ACTGACGGTG
ATGAACTTTG CCGTTATCCC AGCTTTGATA GCGCCCCTTG TTGGCCCGCT GGTTGGCGGT
TATCTGGTGC AATATGCCAG CTGGCACTGG ATTTTTTTGA TTAATATTCC GATGGGGATA
CTGGGCTTTC TCCTTGGTTT TAAATTGGTA CCTGATATCA AAGAAGCCGC TGGCAAGTTG
GACTGGTTTG GTTTTGGTCT ATTTGCGCTC GCCGCTGGAT TATTGACGCT GGCAGTTGAG
CTGTTATCCA AGCCAGGAGA GGCCATCCCA GGCTTTGTTC TTATCGCGGC CGCACTTGGC
TTGTTACTCA TGTATGTGCG CCATGCCCGA AAGGCAGGCA ACCCTATTTT TCCGCTGTCG
TTATTTGATG TTCGAACCTT TAGAATTGGT ATCACCGGTA ACTTATTTAC CCGACTTGGT
ATCAGTGCTG TGCCCTATTT ATTACCGCTA TTGTTACAGG TGGCATTTAA ATATACCCCA
TCGCAGGCAG GCTGGTTGTT AACTCCTATT GCTGTCGGCG CCATGGGCAT CAAGCCTTGG
GTAAGTAAAA TCATTCAGCG CTTTAGCTAC CGCAAAGTAT TGGTCACCAA TACCACCATC
CTTGGTATTT TGATTATTTT ATTGGCGCAG CTAAATGCCT CGATACCTTG GTACTATATT
GCACCGCTTT TGGTGATTAT GGGGGCATGT AACTCAATGC AGTTTAGCGC CATGAACACC
ATTACTATCG GTGATCTAGA AGGCAGTCAA ACCAGTAGTG GTAATAGCTT GATGGCTGTT
AATCAGCAGT TGGCCATTAG TTTTGGTATT GCTTTTGGCG CCACCATATT GAGCGTCTTT
AGCGATAGGC TTAACTTTGA GATTGTTAGT GCCTTTCATG CCACCTACTA TGTGCTGGGT
ATTATCACCA TCATCTCTGG GCTGTCATTT TTAAGATTAA AACCTGAAGA TGGCCGCGGC
TTATACTAA
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| Protein sequence | MPNNSNNQEI TNTTATSLAS DLQPKFTLSA VQAKFLPYVL AVALFMQILD ATILNTALPE
MALALGESPL KMQWAVISYA LTLAIFIPIS GFMADKYGTR KVFLTAIVLF SIGSIFCAMS
PNLDILVASR ILQGVGGAMM TPVARLILVK SYPRNQLLTV MNFAVIPALI APLVGPLVGG
YLVQYASWHW IFLINIPMGI LGFLLGFKLV PDIKEAAGKL DWFGFGLFAL AAGLLTLAVE
LLSKPGEAIP GFVLIAAALG LLLMYVRHAR KAGNPIFPLS LFDVRTFRIG ITGNLFTRLG
ISAVPYLLPL LLQVAFKYTP SQAGWLLTPI AVGAMGIKPW VSKIIQRFSY RKVLVTNTTI
LGILIILLAQ LNASIPWYYI APLLVIMGAC NSMQFSAMNT ITIGDLEGSQ TSSGNSLMAV
NQQLAISFGI AFGATILSVF SDRLNFEIVS AFHATYYVLG IITIISGLSF LRLKPEDGRG
LY
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