| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1115 |
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| Symbol | |
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| ID | 5206807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1369395 |
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| End bp | 1372718 |
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| Gene Length | 3324 bp |
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| Protein Length | 1107 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640599336 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_001280015 |
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| Protein GI | 148652922 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACCA GCCCAAGTAT AAACTTCAAA GAAGAATTTA GTGCCAAGAT ACCTGCCCTC
ACCTTGTTAA TGAACTTGGG TTATCACTAT CTATCGCCAG CACAGTGCTT CAAGCTGCGC
AGCCCCAAGA ATAATACCAT TAGCCACTCA GCGACCCATA GCAGCAACCA AGTGATGCTA
TTGCCAGTGC TGCGTGAGTT CTTAGCCAGT CAAACCTTTC CCTTTGAAGG CAAACAGCAT
CACTTATCTG ATGCCAGCAT CGATAAGATT GTGCATCAGC TCACCCCAGC CTTAAACCAA
GGGCTTAGTA AAGCCAATGA AATCATTTAT GACGCCCTAC TATATGGCGT TGGGGTTACT
GAATTCGTTA ATGGTAAAAA AGCATCGCCG ACCATTAAGC TTATTGACTG GGATAATATC
CATAACAACC GCTACCATGT GACAGAGGAG ATGGTGGTTC AAAACAGCGA TGCCACAGGC
AATGTCATCC CTGATATCGT CTGCTTCGTG AACGGTCTGC CACTGGTGGT CATCGAGGCC
AAGCGCCCAG ACTCTAATAA TCCGCACAAA TCGACCAATA GCCAAGCCAT CTCGCAGCAC
CTGCGTAACC AAGGCCAAAA GTACATTCCG CATCTGTTTG CTTATAGCCA ATTGCTACTG
GCGATTAATG GCTACGAGGG GCTATATGCA ACGTGCAATA CCCCAGAGAA ATTCTGGGCC
AAATGGATTG AAGAAGAGCT TGAAGAGGCA GAATTTAAAC AATTAAAAAA TCAGCCGGTA
CACCCAGATC AATTAGCGGC TTTGTTCGCT CATCGCAAAC CTAGAGATAA GCAAGAGTAC
CTATCGCTTG TCCAGTCAGG GCAGCTGACA GTGACTGACC AAGACCGCTT GATTATCAGT
CTACTGCGCC CCGATAGACT GCTTGATATG ACCCGCTTTT ATACCCTATT TGATAGTCGT
GCCGGCAAGA TTGTCGCCCG CTATCAGCAG GTATTCGGTA TTAAGGCACT GATTAAGCGG
GTCAGTCAGC TTGATGACAA AGGCAGTCGC GCGGGCGGCG TGATTTGGCA TACCACAGGC
AGTGGTAAGT CATTTACCAT GGTGTTTTTG TCCAAAGCCT TGATTTGGCT TGAGGATCTG
GCCAAATGCC GGGTGTTTGT AGTCACTGAC CGCATTGATT TAGAAAACCA AATTGCGCGC
ACCTTTATCT CAGCTGGCGC CCTTAGCGAT AAAGACAAAG CGATGGCCAA GGCCTTATCC
GGTCGAGACT TGGCAAAAAA GGTGGGGCAA GGTAATGAGC GTATTATCTT CTCTATTATT
AACAAATTTG GCGCCGCCGC GCAGTACCCC GAATTTTATA ACCCCAGCGA AAACATTATC
GTCTTGGTCG ATGAAGGTCA CCGTAGCCAA AATGGTGCCA ATAATATCCT TATGCAAAAG
GCGCTGCCAA ATGCCGCTTT TATTGCCTTT ACCGGTACGC CGCTGCTCAA AGACGATAAG
ACCGAAAATA AATTTGGTAA AATCATCCAC TCTTATACCA TGCAGCAAGC GGTAGCCGAT
AAGACCGTTA CTCCCTTGTT ATATGAAGAG CGCATACCTG AGCTCAACAC CAATGATGTC
GCCATTGATA AATGGTTTGA TCGCATCACT CAGAAGCTGA CCACTGAACA AAAAGCCGAC
CTTAAGCGTA AATTTGCCAA AAAAGGACAG GTGTATCAAG TCGAGGGGCG TATTGAGCTT
ATCGCCCATG ACATCTCAGA TCATTTTCAA AACTTCAAAC AGCAAGGGTT AAAAGGTCAA
CTGGCCTGCG ACTCTAAAGC TTCAGCCATT CGCTATAAGC AGGCACTAGA CAATATTGGC
AAAGTCACCT CAGTGGTCGC GATGTCACCG CCTGATACCA GAGAGGGCCA TACTGAGGTC
GATGTAGAGA GTAAAGATAT CGTTCAAAAC TGGTGGATGC AGCATGTCGC GCCCAACTAT
GGTATGGATG ATGTGCAATA TACCAAGGAC ATTATCGATG CCTTTAGCCA AGACGATGGG
CCCGATATTA TGATCGTGGT CGATAAGCTA TTGACCGGCT TTGATGAGCC CAAAAACACC
GTACTGTATA TCGACAAGCC GCTTAAAAGC CATAACCTGA TTCAGGCCAT CGCCCGAGTG
AACCGCTTAC ACAGCCATAA GCAATTTGGG TATCTTATTG ATTATCGAGG TATTTTAAAA
GAGCTTGATA CCACCATCGA AGATTATCAG AATTTGGCTG AGCGGACTCA AGGCGGGTTT
GATATAGATG ACTTAGCTGG CATGTATAGC TCGATGCAGA GTGAGTATAA GAAGCTGCCC
ATGCTGCATA GCAAGGTCTG GGCCATCTTC GCTGATGTGG CTAATAAGCA AGATGGGCAC
GCACTACGTC AGGCGTTATC GCCCAAGATG CAACAGCGTG ATGGCATGAT CGTCGATACC
AACCTTAAAA AACGCGATGA CTTTTATGCT GCCTTGACTG AATTTACCAA TACCATGAAA
GTGGCGCTGC AATCGGCGTC TTACTTCGAC GATACTTTTT TTGACAAAAA GCGCAATTTG
TATAAAAAAG ACTTAAAGGC CTTTATCGAG CTGCGTAAGC AAGTGCGTGA AGATGCCAAT
GAGACCATCG ACTTTGATGA GTATGAAGAC GACATTCGAA ACCTACTCAA TAAGCACATC
GCCGGTCTTG AGGTCAAAGA GCCTGAGGGT GCTTATCTGG TGGGTAATAT GGGGAAAGAG
GTCAAGCCTG AACAGCTGAA CGATGATGAG GCACGTAACC AGACCGATAA GATTACTAGC
CGAGTGACCA AAATGATTGA AGTAGACTTG GCCGATGACC CTTATGCTCA AGAGCATTTT
TCTAAATTAT TAAAGCAGGC CATTGAAGAT GCCAAGGCCA TGTTCGATGC CCCAGTGAAG
CAATATATGA TGTTTGCCGA CTTCGAGCAG GATGTCAAAG CCCGTAACAT GCCCGATGTG
CCCAATGCCT TTGTTGATCC ATCAGGCGTG CATAACAAGC ATGCTCAAGC TTACTTTGGT
CTGTTTAAGC ATTTATTTCC CAAAAGTTTG CTCATCGACA ATCAGCTTAG CGAGCAGGAC
TTGGTCAATT ATGCATTTGA GATTGATAAA CTCGTCAATA CTGCGGTTAG CGAGAACTCG
TTAAATCCCG CCCAAATGGA GAAGTCAATT AACTTTGAAA TGATGCGCTT ATTGTACAAG
GCAATCGGTA TAGACAATAC CAAGCGTATG GCTCAAGAAG TGATTAATAT CGCACGCTTG
GGTCTATCAC GGGGCAAGCG ATGA
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| Protein sequence | MHTSPSINFK EEFSAKIPAL TLLMNLGYHY LSPAQCFKLR SPKNNTISHS ATHSSNQVML
LPVLREFLAS QTFPFEGKQH HLSDASIDKI VHQLTPALNQ GLSKANEIIY DALLYGVGVT
EFVNGKKASP TIKLIDWDNI HNNRYHVTEE MVVQNSDATG NVIPDIVCFV NGLPLVVIEA
KRPDSNNPHK STNSQAISQH LRNQGQKYIP HLFAYSQLLL AINGYEGLYA TCNTPEKFWA
KWIEEELEEA EFKQLKNQPV HPDQLAALFA HRKPRDKQEY LSLVQSGQLT VTDQDRLIIS
LLRPDRLLDM TRFYTLFDSR AGKIVARYQQ VFGIKALIKR VSQLDDKGSR AGGVIWHTTG
SGKSFTMVFL SKALIWLEDL AKCRVFVVTD RIDLENQIAR TFISAGALSD KDKAMAKALS
GRDLAKKVGQ GNERIIFSII NKFGAAAQYP EFYNPSENII VLVDEGHRSQ NGANNILMQK
ALPNAAFIAF TGTPLLKDDK TENKFGKIIH SYTMQQAVAD KTVTPLLYEE RIPELNTNDV
AIDKWFDRIT QKLTTEQKAD LKRKFAKKGQ VYQVEGRIEL IAHDISDHFQ NFKQQGLKGQ
LACDSKASAI RYKQALDNIG KVTSVVAMSP PDTREGHTEV DVESKDIVQN WWMQHVAPNY
GMDDVQYTKD IIDAFSQDDG PDIMIVVDKL LTGFDEPKNT VLYIDKPLKS HNLIQAIARV
NRLHSHKQFG YLIDYRGILK ELDTTIEDYQ NLAERTQGGF DIDDLAGMYS SMQSEYKKLP
MLHSKVWAIF ADVANKQDGH ALRQALSPKM QQRDGMIVDT NLKKRDDFYA ALTEFTNTMK
VALQSASYFD DTFFDKKRNL YKKDLKAFIE LRKQVREDAN ETIDFDEYED DIRNLLNKHI
AGLEVKEPEG AYLVGNMGKE VKPEQLNDDE ARNQTDKITS RVTKMIEVDL ADDPYAQEHF
SKLLKQAIED AKAMFDAPVK QYMMFADFEQ DVKARNMPDV PNAFVDPSGV HNKHAQAYFG
LFKHLFPKSL LIDNQLSEQD LVNYAFEIDK LVNTAVSENS LNPAQMEKSI NFEMMRLLYK
AIGIDNTKRM AQEVINIARL GLSRGKR
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