Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1114 |
Symbol | |
ID | 5206806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1368634 |
End bp | 1369398 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640599335 |
Product | hypothetical protein |
Protein accession | YP_001280014 |
Protein GI | 148652921 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGACC GCGCTACAGC CAAAAACAGC CACCGCTTAT ATTATGGCGA AAAACTCATT GATTATGAAG TAGTGCGCAA GGCCAATAGT CGTAAATTAC GCATCAAGGT TCACCCCGAC CAACGGGTAG TGGTCACAGC GCCTATGGAC ACCACACAAG CCTTTATACA AAGCTCAGTA AATAAAAAGG CGGGCTGGAT ATGGCAGCAC GTACAAGATT TTGCCAAGCA AAAAAGCGAT GTACTGCCCA AGCGCTATAT CAGCGGCGAG ACCCAGTTTT ATTTGGGGCG AAGATATGTG CTCAAAGTCA CAGCTGATGA TCAGCGGCCA GAAGCGGTAA AACTGTATCG AGGTAAGCTT AATGTCAACC TAAGCCATGA GCAGCTTGAG ACTCAAGAAA GAGCCGCCAA AGTCAAAAGC TTGCTGGATA ACTGGTATCA GCAAAAAGCC AAAGCGGTGT TCTATGAGCG CTTATTGGCC ATGCTGCCTA AGACCGATTG GGTTAAGGGC ACGCCTGCCT TTCGACTACT GTCGATGAAA AAACAATGGG GCAGCTGCTC TACCCAAGGT AATCTGGTGC TCAATCCGCA TTTGGTCAAA GCGCCCAAAG AGTGCATTGA TTATGTGATA CTCCATGAGC TGTGTCATAT TGCTGAGTAC AACCATAGTG AGCAATTTTG GCGGCTGCTA ACCCAAGTCA TGCCGCAGTG GAAAGCACTA AAAACTCAGC TTGATAGCAT GGCCGAGCTG TATCTAAATG AGTAA
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Protein sequence | MTDRATAKNS HRLYYGEKLI DYEVVRKANS RKLRIKVHPD QRVVVTAPMD TTQAFIQSSV NKKAGWIWQH VQDFAKQKSD VLPKRYISGE TQFYLGRRYV LKVTADDQRP EAVKLYRGKL NVNLSHEQLE TQERAAKVKS LLDNWYQQKA KAVFYERLLA MLPKTDWVKG TPAFRLLSMK KQWGSCSTQG NLVLNPHLVK APKECIDYVI LHELCHIAEY NHSEQFWRLL TQVMPQWKAL KTQLDSMAEL YLNE
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