| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1106 |
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| Symbol | |
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| ID | 5206106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1357161 |
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| End bp | 1359428 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640599327 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001280006 |
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| Protein GI | 148652913 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACC ATCATCTTGC ATTATCTGTT CTAAGCTTAT GTGTGAGCCA GCAGCTTTAT
GCCCAAACCG AGGCAGGCGC TGCTGCAAAT AATAATCCAA GTGTAGATAT CTCTGAGTCG
ATACAAACGC AGCAGCAAGC AGCCCCTCAA GCAGAATTTG AGGCGATTGT GGTTAAGAGT
AAAGCAAAAA CAGGGACAGC CTTAGCACAG AAAATTAGTG AAATGCCCTC TGTAACCCAA
ATCATTCCCG AAAAAGATAT CCAAGCTCAA GCGGTGGGCA GTCGTACCAC AGGCGACATA
TTGGCGCAGC TTATTCCAAG CTTAGGCACC AGTAGCGGCT CGACCAGTAA CTACGCCACG
ACTATGCATG GCCGTCCGGT ACAGTTTTTA TTAAACGGGG TGCCGTTAAC CGGTTCACGT
AACTTATCTC GAGAGCTCAA CAGCATTGAT CCGGCACAAC TTGAGAGAGT GGAGGTATTA
TCAGGGGCGA CCAGTATTTA TGGGGCAGGC GCTGCCGGCG GCTTAATTAA CCTAGTTACC
AAATCTACGC AAGGAGTCGG CTTACAGCAC CAAACCCGTT TAGGTCTAAG CAGTGCTCGA
GATTTTGACT CTGATTCATT GGGCTACAGC GTGGGCCAAA GCCTTGCTTA TGGCGGTGAG
CAGATGTGGG GCCGCTTGGA TGTTGATTAT GAAGAAAAAG GTGGAGAGTT TGACAGTCAC
GGTCATCGTA TCAGCCCTGA TGTCAACCAA ACCGACCAGC AAGATACCAA ATCACTGAGT
GTCAATGCCA ATATTGGCGC AAATATTGGA CAGTCACAAA GTGTCGATTT GGCAGTGACC
TATTATAATG ATGAGCAAGA GACGGATTAT GGCAACAATC TAGGGGTGTT ATTGAAGGGG
AAGACGCCTT CACTGCGTGC CGTAAAAGGG GCGCATTTGG ATCAAGAGCC GATGACACGC
AAAACCTCGG TCAATCTAAA CTATAATAAC AGTGATTTTG CCAAATCTAA CCTGAGCATT
ACCGGCTATT ACCGCGATGA AAAAGGACGT TTTTATCCTT CTGGTAAGCA GGTAGGTAAG
GCGGTAATAG TCGCTCAGTC AGAGGCAGAT ATTGAGGTGG CTGGTGTCCG CGCCGCCATG
CAAACTGAGT TTGATATCAA GGATATGCCA ACGCTTATAA GTTATGGCGC CGACTATGAG
CGTGAAAAGA GTGAGCAGAC CTATTACGGT CAAGATTTAG ATAAGTTTAT TGCCAGTAAT
GGTCTAATCG CTGAGTCAAA TGGGCATACC TATGCTGGCG GGCCTGACAC CACTACCGAT
AAAATCGGTG CCTTTGTCAA TGCAGACATT GATTTAAGCG ATAAGTGGCA TACCAGCGCA
GGTATACGTT ATCAAAAGCT CAAATCAGAT ACCGATAGCT TTACACCGCT TGCTGAGCAG
GTATTGCAAG AGTATTTTAA TCAGCCAGCA GGCAAGGTTG CACCTGGCAA GACCAATCAC
AGTAAGACCT TATTTAATAT AGGCACCAGC TATCAGATTA CGCCAAATGA TCAAATTTTT
GCCAATTTCT CTCAAGGTTT TACCACAGCT GATATCCAGC GCGCGCTACG CGATGTTCCG
TCAGGCTTTG TGGTCAACTC TGATAATGTG CAGCCCATCG AAGTGGATAA CTATGAGCTG
GGCTGGTCGG GCATTCACGG TAACACTCGA GCCAAATTAA GTGGCTTCTA TAATGAGTCG
GATAAGACGG TACGCTTCAA TGATGATTAT ACGGTTGAAG TTGTCGACAC AGATGAGCGT
GTTTATGGGG CAGAAGCGTC TATTAGTCAA AAGCTTGATG ATAATTGGCA GCTGGGCGGC
AGCTTGGCGT ATACCCGAGG CCAATACAAG AGCCAAGGCG ACTGGCTAGA GCTTGGTGCA
GATCGTCTGA CCCCGATCAA GGGCACAGCT TATGCGCAAT ATAACTTCGA TAAGGGCAGT
AATATTCGCC TGCAAGTTCT AGCAATCGAT GGCACGGACA GAGCCCATAA AGATCAACAA
AAAGACAATG ATACTAAGAC CAATGCCAAT GCTATCTCAG GTTACGCCAC GTTTGATTTG
TTAGGTCAAA TGCAGTTGGG TCAAGGCAAA GGCAGAATTG ATTATGGGAT TTATAACCTA
CTCAATAAAG AGCATATCAA TGTGTATCAC CAAGCCACCT ATGGCGATAT GAACCGCCTG
CCATCACAAG GCACTACCTA TGGTATCAGC TATACCATTG ATTATTAA
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| Protein sequence | MKNHHLALSV LSLCVSQQLY AQTEAGAAAN NNPSVDISES IQTQQQAAPQ AEFEAIVVKS
KAKTGTALAQ KISEMPSVTQ IIPEKDIQAQ AVGSRTTGDI LAQLIPSLGT SSGSTSNYAT
TMHGRPVQFL LNGVPLTGSR NLSRELNSID PAQLERVEVL SGATSIYGAG AAGGLINLVT
KSTQGVGLQH QTRLGLSSAR DFDSDSLGYS VGQSLAYGGE QMWGRLDVDY EEKGGEFDSH
GHRISPDVNQ TDQQDTKSLS VNANIGANIG QSQSVDLAVT YYNDEQETDY GNNLGVLLKG
KTPSLRAVKG AHLDQEPMTR KTSVNLNYNN SDFAKSNLSI TGYYRDEKGR FYPSGKQVGK
AVIVAQSEAD IEVAGVRAAM QTEFDIKDMP TLISYGADYE REKSEQTYYG QDLDKFIASN
GLIAESNGHT YAGGPDTTTD KIGAFVNADI DLSDKWHTSA GIRYQKLKSD TDSFTPLAEQ
VLQEYFNQPA GKVAPGKTNH SKTLFNIGTS YQITPNDQIF ANFSQGFTTA DIQRALRDVP
SGFVVNSDNV QPIEVDNYEL GWSGIHGNTR AKLSGFYNES DKTVRFNDDY TVEVVDTDER
VYGAEASISQ KLDDNWQLGG SLAYTRGQYK SQGDWLELGA DRLTPIKGTA YAQYNFDKGS
NIRLQVLAID GTDRAHKDQQ KDNDTKTNAN AISGYATFDL LGQMQLGQGK GRIDYGIYNL
LNKEHINVYH QATYGDMNRL PSQGTTYGIS YTIDY
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