Gene PsycPRwf_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1102 
Symbol 
ID5204732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1351315 
End bp1352079 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content47% 
IMG OID640599323 
ProductABC transporter related 
Protein accessionYP_001280002 
Protein GI148652909 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACAAG CCCAGCACCT TTCTATTAGC CGTCAAAACA CCCTATTATT ACAAGACATA 
AACTGTCAGA TTGCGACCAA TCAATTGGTT GCTCTGGTTG GCCACAATGG CTCCGGAAAA
TCCACTTTAA TAAAAACCTT GGCAGGCGAG ATGTTACCAA GCTCAGGGTC GCTTGTGCTT
GAAAATAGAC CGCTTAGCGA TTATGGCAGT AAAGATTTGG CCAAAAAACT GGCCTATTTG
CCGCAGCAGT TACCCGATGC CGCCTCTTTT AGCGTCAGTG AGCTTGTGAT GCTCGGCCGC
TATCCGCATC AAAAATGGCT ACAAAAACCC AGTCAAATAG ACCGTGATAA AGTCACTGAG
GCCATGCATT TGACTCAGGT GGCACCCTTT GCTGATCGCA TTGTGTCTAC CTTGTCGGGC
GGTGAGCGAG CACGGGTTTG GCTGGCGATG TGCTTGGCTC AAGATACCCA ATATCTGCTA
CTTGATGAGC CATTGGCAGC ACTAGATGTC CGCTATCAGC TAGAGGTGAT GGCACTGATT
AGACAGCTGG TAGATACACA GGGCTTGGGA GTGGCTATGA TTGTACATGA TATTAATCTT
GCCGCTCAAT ATGCAGACCG TATTGTTGCG CTAAAAGCTG GGAAGATCTG CCATGATGAT
ACGGTGGCTA ATATCATGCA GCCAGACGTG TTAAAAGATA TTTTTAATGT CGATATGCAG
CTGCTAACTC ATCCAGTTAA TGGCCAACCT GTGGCAGTGG TGTAA
 
Protein sequence
MLQAQHLSIS RQNTLLLQDI NCQIATNQLV ALVGHNGSGK STLIKTLAGE MLPSSGSLVL 
ENRPLSDYGS KDLAKKLAYL PQQLPDAASF SVSELVMLGR YPHQKWLQKP SQIDRDKVTE
AMHLTQVAPF ADRIVSTLSG GERARVWLAM CLAQDTQYLL LDEPLAALDV RYQLEVMALI
RQLVDTQGLG VAMIVHDINL AAQYADRIVA LKAGKICHDD TVANIMQPDV LKDIFNVDMQ
LLTHPVNGQP VAVV