| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1100 |
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| Symbol | |
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| ID | 5204730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1348049 |
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| End bp | 1349662 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640599321 |
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| Product | nuclease SbcCD, D subunit |
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| Protein accession | YP_001280000 |
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| Protein GI | 148652907 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAACT CTACTTCGTT ATCCCACCCC CCAAAACCAC TCACCATTTT ACATACCTCA
GACTGGCATC TGGGACGCCG TTTGTATGGT CAATTGCGCT ACCATGAATT TGAGGCTTTT
TTGGCATGGC TGACTCAGAC CTTGCAGCAA TATCAGGTCG ATGTGCTGAT CGTCGCTGGT
GATGTATTTG ACACCATGAC GCCCAGTAAT AAGGCTCAAG CGCTGTACTA TGAATTCTTG
GGTGTGGTCT CTAAGTCGCA CTGCGATCAC GTGGTGGTGG TGGCTGGCAA TCATGACTCC
CCTACCTTCT TGGACGCGCC AGCCAATGTG CTCAAAGCGT TAAACGTGCA TGTGATTGGC
ACCGCTTGCG AAGATGTGGC CGATGAAGTA TTGGTGCTCA CAGACAGCCA AGATCAAGCG
CAATGCATCA TCGCGGCGGT GCCTTATCTT CGTGACCGTG ATGTGCGTAG TGCTCAAGCA
GGCGAGTCAG GCGCAGATAA AGATGCCAAT CTGTTGGCTG GCATCCATGA GCACTATGCG
AAGGTAGCGC AGGTTGCCAA AGCCAAACAG GCCAAGCTGA TCACTCAGCA GCAGCGCCAT
ATCCCTCTTA TTGCCACTGG TCATTTGTTT GCCGCAGGGG GTGCGACCAC AGCTGATGAT
GGGGTACGTG AGCTGTATGT CGGCAGTCTG GGTAAGATTT CAGCCGATAT GTTTGATGAG
TGCTTTGATT ATGTGGCACT TGGGCACCTG CATGTGCCGC AAAAGGTGGG CGGCCGTGAG
CACATTCGTT ATAGTGGCTC CCCTATTGCG ATGGGCTTTG GAGAGGCCAA TCAGACCAAA
CAGGTATTGT TGGTACAGTT TGGCCAAAAT TTAGCCTCTG ATAGCCTTAA AGAGCGCGTT
CAAGAGCACA TTAAAGAGCG CATTGAGGAG GCTTCTACGG CACCTCAAAT ACCTACTGCA
CCTCAAATAT CTGCTAAGCC CAGCCATACC TTAACGACAC CGGCAGCAGG CGCAGCTGCC
AATTCATCTC AAGCGGATTT GTTTTGTGGA GATTTATTTG ACGATTGGCT TGAGCCGACA
GCAAATCAGC CATCTCAGCT GCAAACCCAT GCAGATTCAG CAGCAGATTC TATAAGCCAA
TTAGACAAGC AGCATAAGCC AGATGAGGCA CTGGCGGCCA AAACCTTGCA CATCACCGCC
GATAATACCA TGCAAATTAT CGCGGTTACT GTGCCTTGCT TTCAGCAGCT CTTGCCCATT
TCAGGTGATA TCAATCATAT TCTACAAAGC CTGCAACAAC TTGCACACAC CAAGCCCATT
TGGATAGAGG TGGCTTATAC CGGCGATGAA ATCGTCAGCG ATTTGCGCGA GCAGATCCAT
GCTGCCGTGG CTGGCACACC TTTTGAGGTA TTAAAAATTA AGAACCATCA GGTTCGTAAC
AAGGTGCTCA AAGCACAGAG CACGCATGAG ACGCTGCAAG ACTTGGATGA AATGCAGGTC
TTTGAGCGCT GCTTAGTGGC GAATAAAGTG GCAGAATCTC AGCGTCCCAG CTTGCGCGAG
GCCTATGCAC AAATCGTGTA TCAAATCCAT CATGATGACT CAATGGCCGA GTAG
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| Protein sequence | MSNSTSLSHP PKPLTILHTS DWHLGRRLYG QLRYHEFEAF LAWLTQTLQQ YQVDVLIVAG
DVFDTMTPSN KAQALYYEFL GVVSKSHCDH VVVVAGNHDS PTFLDAPANV LKALNVHVIG
TACEDVADEV LVLTDSQDQA QCIIAAVPYL RDRDVRSAQA GESGADKDAN LLAGIHEHYA
KVAQVAKAKQ AKLITQQQRH IPLIATGHLF AAGGATTADD GVRELYVGSL GKISADMFDE
CFDYVALGHL HVPQKVGGRE HIRYSGSPIA MGFGEANQTK QVLLVQFGQN LASDSLKERV
QEHIKERIEE ASTAPQIPTA PQISAKPSHT LTTPAAGAAA NSSQADLFCG DLFDDWLEPT
ANQPSQLQTH ADSAADSISQ LDKQHKPDEA LAAKTLHITA DNTMQIIAVT VPCFQQLLPI
SGDINHILQS LQQLAHTKPI WIEVAYTGDE IVSDLREQIH AAVAGTPFEV LKIKNHQVRN
KVLKAQSTHE TLQDLDEMQV FERCLVANKV AESQRPSLRE AYAQIVYQIH HDDSMAE
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