Gene PsycPRwf_1069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1069 
Symbol 
ID5205242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1288778 
End bp1289704 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content48% 
IMG OID640599290 
Producthypothetical protein 
Protein accessionYP_001279969 
Protein GI148652876 
COG category[S] Function unknown 
COG ID[COG3781] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.686021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGTTT TGCAAAAACC CAATGCATTT AAGATACTGT TTACGCTACG TGGCTCCATT 
ATTCCTCATA TTTATCCCCA AGTACTGTTT ATCATTTTAA TCAGTACCAT AATCTCCGCA
GTTCAACACT GGATTCCAAG CTCGTTTTCT TCTTATAGTG CCGCGCCTTT TACCCTTATG
GGGATAGCTT TGTCCTTGTT TTTGGGATTT CGCAACAATG CCAGTTATCA GCGTTGGTGG
GAGGCTCGAA CCTTGTGGGG CCAGCTGGTA TATGAGTCGC GCAGCTTTAC CCGTCAAGTG
ATGTCTTTTA TCGATGACAC ACAACCAGGC GCTCAACAGG CGCAGCATAC GATGGTGAAT
CTGACCATAG CTTTCACACA TGCGCTGCGT CATAGGCTGC GTAAGAGCTC ACCTTGGGCG
GATGTTGAGA GGTTTGTGGC ACCTGAGTAT CACGCTGGTA TGCGTGAAGC TGGCAATTTA
CCTGAGTATT TATTGAGATT GCTGGGCCAA CAGTTGGGCG CTTGCCGGCG AGACAACCTC
ACCTCAGATC TTATGATCCA AAACATGGAT GATAGACTGA CCTCATTAAC TGTGGTGCTA
TCAGCCTGTG AGCGTATTGA CAAGACGCCG CTGCCACTTG CCTATACGTT ACTGGTGCAT
CGGACTACGT ATCTGTACTG CTTCATGTTG CCTTTCGGGC TGGCCACCTC GCTAGGCTGG
GTGACGCCCT TTGTCTGTGG TGTGATTGCC TATACCTTTT TTGGTTTAGA TGCGCTCAAT
GAAGAAATAA CAGACCCCTT TGGCGAAGCG GCCAATCAAC TGCCTTTAAC CACTTTATCA
CGCACCATTG AGCGAAATTT GCTTGAAGCA CTGGGCGAGG ATAATCTTCC CCCTGAACTG
CTGCCTGAGA ATGGTTACCT GCCTTAA
 
Protein sequence
MLVLQKPNAF KILFTLRGSI IPHIYPQVLF IILISTIISA VQHWIPSSFS SYSAAPFTLM 
GIALSLFLGF RNNASYQRWW EARTLWGQLV YESRSFTRQV MSFIDDTQPG AQQAQHTMVN
LTIAFTHALR HRLRKSSPWA DVERFVAPEY HAGMREAGNL PEYLLRLLGQ QLGACRRDNL
TSDLMIQNMD DRLTSLTVVL SACERIDKTP LPLAYTLLVH RTTYLYCFML PFGLATSLGW
VTPFVCGVIA YTFFGLDALN EEITDPFGEA ANQLPLTTLS RTIERNLLEA LGEDNLPPEL
LPENGYLP