Gene PsycPRwf_1048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1048 
Symbol 
ID5204744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1254996 
End bp1256738 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content43% 
IMG OID640599269 
Productsulfatase 
Protein accessionYP_001279948 
Protein GI148652855 
COG category[R] General function prediction only 
COG ID[COG2194] Predicted membrane-associated, metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTTC CTACAAGAAG CCTGCATATG GTGAATCAAA CCTCTTCCTC AGTCGATACT 
GCTCCCTTAT CACAGCCCAC GAACCTTGCC TCAAGCCAGC AAGGCAGTGT AGACAAGCGC
TCATATTTGA AGTTGTTTTC TCAAAGGCCT ATGAATGCCA ATATATTGGT ATTCATAGTG
GCACTTTATT TGACACTGAC GGCCAACTTC AGTTTCTTTA ATCAGCTTAC TGCTATTTAT
CCGGTGACTC ATAGCTTGGC CTTTGTAATG TCAGTGGGTG GATTGCTGTT TTGTGTGATT
TGGTTGGTAC TGCAATTAGT AAGTCACAAA TACCTGCACA AACCTATGCT GATATTGGCG
TTAATGATTG GTGCAATTTG TGCGTATTTC ACTGACAGTT ACGGGACTAT CTTTGATACT
CACATGCTTA TAAATGGGCT TGAGACCGAT CAAGCAGAAG CTATGGATTT ATTCGCGCCA
GCATTCTTAA TGCGGGTAGT AGTACTTGGT GTTATCCCCG CCTTACTTGT CTCACAGCTG
CGCATTAAAA CGGTGCCGTT AAAGTTTGCA GCCTTACAAA AAATAGGGGC GATTATCGCC
ACTTTAGCTT TGATGGCCGC TTGTCTATTG CCCTTTGGTG ACCAGTACGC CAGCTTTTTT
CGTCAGCATA AACAGGTGCG TTTTTATGCC AACCCCGTGA TGCCTATTTA TTCTTCTATT
AAACTGGGCA CAGATAAATT TGATGAAATG CGTCGTCCAA AGACCCTTAC TGCCCACGCG
ACTGATGCCA AACACATTGC CCCAGCCTCT ACCAAGCCTA AGCTTATGGT ACTGGTGGTG
GGAGAAACCG TGCGTGCCGA TCATATTGGT CTAAATGGAT ATGCACGTAA TACTATGCCG
CTGCTGTCAA ACACCAAAGA CATCTATAGC TTCAAAGACG TCAGCTCTTG TGGCACCTCT
ACTGCTTATT CTGTGCCTTG TATGTTCAGC TATCTGGGTC GAGATAAGTT CGATGTGGAT
ATGGCAAGCT ATAATGAAAA TGTGCTAGAC ACCTTGCATA AACAAGGGGT AAATGTGATA
TGGCGTGACA ATAACTCAAG CTCTAAAGGG GTGGCCGATC GCGTCACTTT TGAGGATTAC
AAAACTCAGG CAACCAATCT AGAGTGTGAT GTTGAATGCC GAGACATTGG CATGTTAAAA
GATTTTGATA AATTGGTAAT GGGCTCAAAA AACAGCCCAC CAAAAGACAC CTTAGTGGTA
CTGCATCAAA TGGGCAACCA CGGTCCGGCT TATTACAAAC GCTATCCTAA AGCGTTTGAG
GTATTTAAAC CGGCCTGTTT AAGCAATGAG CTCTCAAAAT GTGACACTCA GTCGGTGATT
AATGCCTATG ACAATGCCAT TGTGTATACT GATTATTTTT TGCACAATAT TATTGACACC
TTAAAGCCTT ATGAACAAGC GTATGATGTG GTTATGGTGT ATCTTAGCGA TCATGGCGAA
AGCTTAGGCG AGAACAATAT ATACTTACAT GGCCTGCCTT ATAAAATAGC GCCAAAAGCA
CAAAAGCAAG TACCCGTTAT TGTGTGGTCA CCGGCCTCAA ACCATATGGA TAGTCAAGCC
ATTGCTTCGC AGCTAACTGC TCCGGCCTCA CAAGATTATT TAGCACCTAG CTTATTGCAG
TACTTTAATA TCAGCACCCA AGAGGCAGAC CATAAACCTA CTTTTTTTCA GGCTCAGCGC
TAA
 
Protein sequence
MFFPTRSLHM VNQTSSSVDT APLSQPTNLA SSQQGSVDKR SYLKLFSQRP MNANILVFIV 
ALYLTLTANF SFFNQLTAIY PVTHSLAFVM SVGGLLFCVI WLVLQLVSHK YLHKPMLILA
LMIGAICAYF TDSYGTIFDT HMLINGLETD QAEAMDLFAP AFLMRVVVLG VIPALLVSQL
RIKTVPLKFA ALQKIGAIIA TLALMAACLL PFGDQYASFF RQHKQVRFYA NPVMPIYSSI
KLGTDKFDEM RRPKTLTAHA TDAKHIAPAS TKPKLMVLVV GETVRADHIG LNGYARNTMP
LLSNTKDIYS FKDVSSCGTS TAYSVPCMFS YLGRDKFDVD MASYNENVLD TLHKQGVNVI
WRDNNSSSKG VADRVTFEDY KTQATNLECD VECRDIGMLK DFDKLVMGSK NSPPKDTLVV
LHQMGNHGPA YYKRYPKAFE VFKPACLSNE LSKCDTQSVI NAYDNAIVYT DYFLHNIIDT
LKPYEQAYDV VMVYLSDHGE SLGENNIYLH GLPYKIAPKA QKQVPVIVWS PASNHMDSQA
IASQLTAPAS QDYLAPSLLQ YFNISTQEAD HKPTFFQAQR