Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1048 |
Symbol | |
ID | 5204744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1254996 |
End bp | 1256738 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640599269 |
Product | sulfatase |
Protein accession | YP_001279948 |
Protein GI | 148652855 |
COG category | [R] General function prediction only |
COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTTTTC CTACAAGAAG CCTGCATATG GTGAATCAAA CCTCTTCCTC AGTCGATACT GCTCCCTTAT CACAGCCCAC GAACCTTGCC TCAAGCCAGC AAGGCAGTGT AGACAAGCGC TCATATTTGA AGTTGTTTTC TCAAAGGCCT ATGAATGCCA ATATATTGGT ATTCATAGTG GCACTTTATT TGACACTGAC GGCCAACTTC AGTTTCTTTA ATCAGCTTAC TGCTATTTAT CCGGTGACTC ATAGCTTGGC CTTTGTAATG TCAGTGGGTG GATTGCTGTT TTGTGTGATT TGGTTGGTAC TGCAATTAGT AAGTCACAAA TACCTGCACA AACCTATGCT GATATTGGCG TTAATGATTG GTGCAATTTG TGCGTATTTC ACTGACAGTT ACGGGACTAT CTTTGATACT CACATGCTTA TAAATGGGCT TGAGACCGAT CAAGCAGAAG CTATGGATTT ATTCGCGCCA GCATTCTTAA TGCGGGTAGT AGTACTTGGT GTTATCCCCG CCTTACTTGT CTCACAGCTG CGCATTAAAA CGGTGCCGTT AAAGTTTGCA GCCTTACAAA AAATAGGGGC GATTATCGCC ACTTTAGCTT TGATGGCCGC TTGTCTATTG CCCTTTGGTG ACCAGTACGC CAGCTTTTTT CGTCAGCATA AACAGGTGCG TTTTTATGCC AACCCCGTGA TGCCTATTTA TTCTTCTATT AAACTGGGCA CAGATAAATT TGATGAAATG CGTCGTCCAA AGACCCTTAC TGCCCACGCG ACTGATGCCA AACACATTGC CCCAGCCTCT ACCAAGCCTA AGCTTATGGT ACTGGTGGTG GGAGAAACCG TGCGTGCCGA TCATATTGGT CTAAATGGAT ATGCACGTAA TACTATGCCG CTGCTGTCAA ACACCAAAGA CATCTATAGC TTCAAAGACG TCAGCTCTTG TGGCACCTCT ACTGCTTATT CTGTGCCTTG TATGTTCAGC TATCTGGGTC GAGATAAGTT CGATGTGGAT ATGGCAAGCT ATAATGAAAA TGTGCTAGAC ACCTTGCATA AACAAGGGGT AAATGTGATA TGGCGTGACA ATAACTCAAG CTCTAAAGGG GTGGCCGATC GCGTCACTTT TGAGGATTAC AAAACTCAGG CAACCAATCT AGAGTGTGAT GTTGAATGCC GAGACATTGG CATGTTAAAA GATTTTGATA AATTGGTAAT GGGCTCAAAA AACAGCCCAC CAAAAGACAC CTTAGTGGTA CTGCATCAAA TGGGCAACCA CGGTCCGGCT TATTACAAAC GCTATCCTAA AGCGTTTGAG GTATTTAAAC CGGCCTGTTT AAGCAATGAG CTCTCAAAAT GTGACACTCA GTCGGTGATT AATGCCTATG ACAATGCCAT TGTGTATACT GATTATTTTT TGCACAATAT TATTGACACC TTAAAGCCTT ATGAACAAGC GTATGATGTG GTTATGGTGT ATCTTAGCGA TCATGGCGAA AGCTTAGGCG AGAACAATAT ATACTTACAT GGCCTGCCTT ATAAAATAGC GCCAAAAGCA CAAAAGCAAG TACCCGTTAT TGTGTGGTCA CCGGCCTCAA ACCATATGGA TAGTCAAGCC ATTGCTTCGC AGCTAACTGC TCCGGCCTCA CAAGATTATT TAGCACCTAG CTTATTGCAG TACTTTAATA TCAGCACCCA AGAGGCAGAC CATAAACCTA CTTTTTTTCA GGCTCAGCGC TAA
|
Protein sequence | MFFPTRSLHM VNQTSSSVDT APLSQPTNLA SSQQGSVDKR SYLKLFSQRP MNANILVFIV ALYLTLTANF SFFNQLTAIY PVTHSLAFVM SVGGLLFCVI WLVLQLVSHK YLHKPMLILA LMIGAICAYF TDSYGTIFDT HMLINGLETD QAEAMDLFAP AFLMRVVVLG VIPALLVSQL RIKTVPLKFA ALQKIGAIIA TLALMAACLL PFGDQYASFF RQHKQVRFYA NPVMPIYSSI KLGTDKFDEM RRPKTLTAHA TDAKHIAPAS TKPKLMVLVV GETVRADHIG LNGYARNTMP LLSNTKDIYS FKDVSSCGTS TAYSVPCMFS YLGRDKFDVD MASYNENVLD TLHKQGVNVI WRDNNSSSKG VADRVTFEDY KTQATNLECD VECRDIGMLK DFDKLVMGSK NSPPKDTLVV LHQMGNHGPA YYKRYPKAFE VFKPACLSNE LSKCDTQSVI NAYDNAIVYT DYFLHNIIDT LKPYEQAYDV VMVYLSDHGE SLGENNIYLH GLPYKIAPKA QKQVPVIVWS PASNHMDSQA IASQLTAPAS QDYLAPSLLQ YFNISTQEAD HKPTFFQAQR
|
| |