| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1040 |
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| Symbol | |
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| ID | 5205969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1247267 |
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| End bp | 1248385 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640599261 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_001279940 |
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| Protein GI | 148652847 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.53626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGATT TATTTGACAA CCCTATGGGT CTTCGTGGTT TTGACTTCGT AGAGTTTGCC
TCTCCTGAGC CTGCATTGGT GGCAGAGCTT TTTGAAAAAT TAGGCTTTAC CCATGTGGCC
AACCACAGAT CCAAAGACGT GGCCTTGTAT CGTCAAGGCG ATATCAACCT TATTTTAAAC
CGAGAGCCGA GAAGTCAAGC CAGCTACTTC GTTGAAGAGC ATGGTCCAGG TGCTTGTAGC
ATGGGCTTTC GAGTGGCTGA CTCTCGACAA GCTTATAAGC GTGCCATCGA GCAAGGTGCA
CAGCCTGTTG AGATACCCAC TGGGGTTATG GAGCTTAAGT TGCCAGCCAT TAAAGGCATT
GGCGGCTCGC TTATCTATCT GATTGACCGC TTTGAGGAAG GTAGCTCTAT TTATGATGTA
GATTTTGAGT TTTTACCGGG TGTGGACAAG CATCCTAAAG GCTTTGGCTT TAAGGTTATC
GACCATTTAA CTCATAACGT CTATCGTGGT CGTATGGCGT ATTGGGCCGA CTTCTATGAG
CGTATCTTTA ATTTTCGTGA AATTCGCTAC TTTGATATCA AAGGCGAATA CACCGGCCTA
ACCAGCAAGG CCATGACGGC GCCTGATGGT AAAATCCGCA TTCCGCTCAA TGAAGAAGCA
CGTCAAGGTG GCGGCCAGAT TGAAGAGTAT CTCATGCAGT TTAATGGCGA GGGTATTCAG
CACATTGCGC TACTAAGTGA TGACTTATTG GCCAGTATCG ATCAGCTAAA AGCGGCCGGC
ATTCCGCTAA TGACAGCGCC CAATGATACC TATTACAAAA TGCTTGATGA GCGTCTACCT
GGGCATGGCG AGACAGTCTC AGAGCTACAG ACCCGAGGCA TCTTACTCGA TGGCACCACA
GAGGGCGGCA CGCCAAGACT GCTGTTACAA ATTTTCTCTG AGACCATTTT AGGCAGCCCG
GTGTTCTTTG AGTTTATCCA GCGCAAAGGC GATTATGAAG AAGGCTTCGG CGAGGGTAAC
TTCAAGGCGT TGTTTGAGTC TATTGAGCGT GACCAGCTGC GCCGCGGTAC CATTGATGCT
GATGGGGCCT CAGACAAAGA TACGGCCACT GCAGTTTAA
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| Protein sequence | MADLFDNPMG LRGFDFVEFA SPEPALVAEL FEKLGFTHVA NHRSKDVALY RQGDINLILN
REPRSQASYF VEEHGPGACS MGFRVADSRQ AYKRAIEQGA QPVEIPTGVM ELKLPAIKGI
GGSLIYLIDR FEEGSSIYDV DFEFLPGVDK HPKGFGFKVI DHLTHNVYRG RMAYWADFYE
RIFNFREIRY FDIKGEYTGL TSKAMTAPDG KIRIPLNEEA RQGGGQIEEY LMQFNGEGIQ
HIALLSDDLL ASIDQLKAAG IPLMTAPNDT YYKMLDERLP GHGETVSELQ TRGILLDGTT
EGGTPRLLLQ IFSETILGSP VFFEFIQRKG DYEEGFGEGN FKALFESIER DQLRRGTIDA
DGASDKDTAT AV
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