Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1030 |
Symbol | |
ID | 5206370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1236035 |
End bp | 1237270 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640599251 |
Product | hypothetical protein |
Protein accession | YP_001279930 |
Protein GI | 148652837 |
COG category | [S] Function unknown |
COG ID | [COG2855] Predicted membrane protein |
TIGRFAM ID | [TIGR00698] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.706838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGCCC ATCCTACTAC CCCAATTAAA ATCCATCCCA CTCAGCACAG TCGAGACAAT AAAGGCTTAT ATCGACTGTC TGTGTCTGCT TTATTGAATA AATTGAATCA GATGCTAGGT GGTTATCTGC CAAATAGAAA AAACATATTG GGGCTGCTGA TGGTGTTATC TGGCAGCTTA ATCAGTATTT GGCTAAATGA GCGCATTCAA GATTGGACTG AGCATAGCGT GCTGGGCTTG TCGGCATTAA CCTTAGCCAT TTTGATAGGT ATGGTTCTGG GCAATACCCT CTATCCAAGA TTTGCCAACT CTTTGACAGA AGGCGTCACT TTCTGTAAAG CTCAAATACT GCGCTTGGCC ATTGTGCTAT ACGGCTTTAA GATTACCCTG GCGCAAGTGA TGAGTGTCGG CGGCGGCGCC ATCGCCACTG ATGCTTTGGT ATTAAGCTCT ACCTTTATGA TGACCTACTT ACTGGGTACC AAAGTCTTAA AAATGGATCG AACCACCACC ATGCTGATTG GTTCAGGCGC GAGTATTTGC GGGGCAGCAG CAGTCATTGC AGCAGAACCG GTACTCAAAG CAGAGTCGCA TAAAGTGACC ATCGCTGTGG CTACTGTAGT GGTGTTTGGC ACTTTATCTA TGCTGCTGTA TCCACTGCTG TACCAGATGG GCTGGCTTGC AGGTATTATT GATCCTCAGC ACTATGGCGT CTATATCGGC TCCACCATTC ACGAAGTGGC GCAGGTAGTG GTTGCCGGTA ATGCCATCAG CCCTGAAGTC GGCAATACAG CAGTGGTTAC TAAAATGATT CGGGTAATGA TGCTGGCCCC ATTTTTACTG CTGCTATCTG TATTTGTCAC CTCAGTAGAT AAGGCCGCTC AAAGCACAGC AATATCTTCT ACACATCAGC CCAGCAAGAT ACAGCTTATA TTACAGCGTT TCAAAAGTAT TCAGGTGCCT TGGTTTGCCT TTGTATTTTT GGCCATGGTT GGCATCAACT CTTTGCTCAG CTTATTACCA GGCTCTGCTG CTCCTGTGGT ACAAAGCGCT ACTCAAGCTA TGATACATCT GGATAATCTG CTACTCACTA TGGCTATGTT TGCACTGGGC CTGACCACTC ATTTTAACGC CATTAAAAAA GCGGGCATTA AGCCTTTAGT CTTAGCAGCA GTTATGTTTA TTTGGCTTAT CTTAGGTGGC GCGGCTATTA ATATAGTGAT GACTCAGATT AGTTAA
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Protein sequence | MRAHPTTPIK IHPTQHSRDN KGLYRLSVSA LLNKLNQMLG GYLPNRKNIL GLLMVLSGSL ISIWLNERIQ DWTEHSVLGL SALTLAILIG MVLGNTLYPR FANSLTEGVT FCKAQILRLA IVLYGFKITL AQVMSVGGGA IATDALVLSS TFMMTYLLGT KVLKMDRTTT MLIGSGASIC GAAAVIAAEP VLKAESHKVT IAVATVVVFG TLSMLLYPLL YQMGWLAGII DPQHYGVYIG STIHEVAQVV VAGNAISPEV GNTAVVTKMI RVMMLAPFLL LLSVFVTSVD KAAQSTAISS THQPSKIQLI LQRFKSIQVP WFAFVFLAMV GINSLLSLLP GSAAPVVQSA TQAMIHLDNL LLTMAMFALG LTTHFNAIKK AGIKPLVLAA VMFIWLILGG AAINIVMTQI S
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