Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1022 |
Symbol | |
ID | 5206560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1215178 |
End bp | 1216593 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640599243 |
Product | peptidase U32 |
Protein accession | YP_001279922 |
Protein GI | 148652829 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0199703 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAAT CAAATCAAAT CGCTCCTGCT CCTCGCGCCC CAGAGCTACT TTGCCCTGCG GGTACATTCA AAAATATGCA GTATGCTTTT GCTTACGGTG CCGATGCGGT TTATGCCGGG CAGGCACGTT ATAGCCTGCG CGTGCGTAAC AATGATTTTG ATGAAGACAA TTTGCGCCGT GGTATTGAGT ATGCACACAG CTTGGGCAAG AAGTTTTATG TGGTGGTCAA TATCCAAGCC CATAATGCTA AGCTTAAGAC CTTTATCGAG GACATCCGTC CTGTGATTGA GATGAAACCT GATGCACTGA TTATGTCGGA TGCCGGCATG ATTATGATGG TGCGTGAACA TTTCCCTGAT ATAGAAATCC ACTTATCCGT ACAGGCCAAT GCGGTTAACT GGGCCACTGT TAAGTTCTGG AAGCAAATGG GGGTAAGCCG CGTTATCGTC TCACGCGAGC TGTCATTAAA GGAGATTAAG CAAATCATCG ATGAAGTGCC AGGCATGGAG ATTGAAGTTT TTGTCCATGG CGCATTATGC ATGGCCTACT CTGGTCGCTG TCTGCTATCC GGCTATATCA ACAAACGTGA TGCCAACCAA GGCACCTGCA CCAATGCTTG CCGCTGGAGC TACAATACTT ATAAAGCTCA AGAAAATGAA ACGGGCGATA TTGTACCAGT ACAAACCTTC AACCCAGCTC AGCAAATCGA CACTGTTAAT TTAAATGGTG ACGTGGTTAT GGGCGATGAC TATGTCCAAG CGCCAAGCGA TGAGGTGGTG TTGCTAGAAG AGCAAAACCG TCCAGGTGAG TTAATGGCCA TGTACGAAGA TGAGCATGGT ACCTATATCA TGAATTCTAA AGACTTACGA GCGGTAGAGT TGGTGCCTGA GCTGACTCAA ATGGGCGTAC ATTCTTTAAA AATTGAGGGT CGAACCAAGT CGCATTATTA TGTGGCTCGC ACCGCTCAGG TATACCGTCA AGCCATTGAT GATGAGGTGG CAGGTAAGCC TTTTGATGAG TCATTGATCG GTGCTTTAGA TGGGTTAGCC AACCGTGGTT ACACCGAAGG CTTCTTACGT CGTCATGTCC ACAGCGATTA TCAAAACTAC GAATATGGTG CTTCAAAAAC AGATCAACAG CAGTTTGTGG CCGAAGTCAT CGACATCAGT GCTGAGCGTC TAACGCTTGA GATTAAAAAT AAGCTTGAGG TCGGCGACAC CATCGAGATT ATGACCCCAC AAGGTAATGT TACCTATACG CTTGAGCAGA TGTGGGACAA AAAAGGCAAT TCGATTGAGG CGGCTTTAGG GTCAGGTTGG GTGGCCCAGA TTAGTAACCC CTTTAAAGAG ATGGACAAGG ACACTTTGCA ATTTGCGTTG GTCATGAAAA ACGTAAAGCA GGCCATTTTC AGCTAA
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Protein sequence | MTQSNQIAPA PRAPELLCPA GTFKNMQYAF AYGADAVYAG QARYSLRVRN NDFDEDNLRR GIEYAHSLGK KFYVVVNIQA HNAKLKTFIE DIRPVIEMKP DALIMSDAGM IMMVREHFPD IEIHLSVQAN AVNWATVKFW KQMGVSRVIV SRELSLKEIK QIIDEVPGME IEVFVHGALC MAYSGRCLLS GYINKRDANQ GTCTNACRWS YNTYKAQENE TGDIVPVQTF NPAQQIDTVN LNGDVVMGDD YVQAPSDEVV LLEEQNRPGE LMAMYEDEHG TYIMNSKDLR AVELVPELTQ MGVHSLKIEG RTKSHYYVAR TAQVYRQAID DEVAGKPFDE SLIGALDGLA NRGYTEGFLR RHVHSDYQNY EYGASKTDQQ QFVAEVIDIS AERLTLEIKN KLEVGDTIEI MTPQGNVTYT LEQMWDKKGN SIEAALGSGW VAQISNPFKE MDKDTLQFAL VMKNVKQAIF S
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