Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1013 |
Symbol | |
ID | 5206858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1205946 |
End bp | 1206692 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640599234 |
Product | hypothetical protein |
Protein accession | YP_001279913 |
Protein GI | 148652820 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.166545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000108366 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGGTC ATTCTAAATG GGCAAATATT AAGCACAAAA AGGCCAAAGA GGATGCCAAG CGCGGCAAAA TCTTCACCAA AATCATTCGT GAGCTGGTTT CAGCGACCAA ACAAGGTGAC CCTGACCCAG AATCTAACCC TCGCCTACGT GCTGCAGTCG AAAAAGCTCT ATCGGCCAAC ATGACCAAAG ACACCATCAA GCGTGCCATC GAGCGCGGTG CCGGTAACTC TGACGGCGGC GAAATGGACG AGCTGACCTA CGAAGGCTAT GGCGTGGGCG GTGTGGCTGT CTTGGTTGAG ACCATGACTG ACAACGTAAA CCGTACCGTC AGTGAAGTGC GTCACGCCTT TACCAAGTTT AGCGGCAACC TAGGCACCGC AGGCTCGGTG GCTTATCTGT TCACCAAACG CGGTGAAATC ATTTTTGATG ATGTCTCACT TGAAGATGAG ATTATGTTAG TGGCGTTAGA TGCCGGCGCT GTCGATATCG AAAATGATGG CGAAAGCTTA CTTGTCATCA CTGAGCCTGA CACTTTTGGT GCGGTAAAAG ATGCGTTAGA TGCAGCCGGC TATGAGTCGA GCAATGCTGA GGTTACCATG TCGCCTTCGA CCACCGCGCT TATCGATAAT ATCGATGATG CCGAAAAAGT GATGAAAATG ATCGATATGC TAGAAGATTT AGACGATGTA CAAGATGTGC ATACCAACGT CGACTTCACT GATGACGTAT TAGCGCAGTT AGGCTAG
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Protein sequence | MAGHSKWANI KHKKAKEDAK RGKIFTKIIR ELVSATKQGD PDPESNPRLR AAVEKALSAN MTKDTIKRAI ERGAGNSDGG EMDELTYEGY GVGGVAVLVE TMTDNVNRTV SEVRHAFTKF SGNLGTAGSV AYLFTKRGEI IFDDVSLEDE IMLVALDAGA VDIENDGESL LVITEPDTFG AVKDALDAAG YESSNAEVTM SPSTTALIDN IDDAEKVMKM IDMLEDLDDV QDVHTNVDFT DDVLAQLG
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