Gene PsycPRwf_1013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1013 
Symbol 
ID5206858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1205946 
End bp1206692 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content49% 
IMG OID640599234 
Producthypothetical protein 
Protein accessionYP_001279913 
Protein GI148652820 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.166545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000108366 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGGTC ATTCTAAATG GGCAAATATT AAGCACAAAA AGGCCAAAGA GGATGCCAAG 
CGCGGCAAAA TCTTCACCAA AATCATTCGT GAGCTGGTTT CAGCGACCAA ACAAGGTGAC
CCTGACCCAG AATCTAACCC TCGCCTACGT GCTGCAGTCG AAAAAGCTCT ATCGGCCAAC
ATGACCAAAG ACACCATCAA GCGTGCCATC GAGCGCGGTG CCGGTAACTC TGACGGCGGC
GAAATGGACG AGCTGACCTA CGAAGGCTAT GGCGTGGGCG GTGTGGCTGT CTTGGTTGAG
ACCATGACTG ACAACGTAAA CCGTACCGTC AGTGAAGTGC GTCACGCCTT TACCAAGTTT
AGCGGCAACC TAGGCACCGC AGGCTCGGTG GCTTATCTGT TCACCAAACG CGGTGAAATC
ATTTTTGATG ATGTCTCACT TGAAGATGAG ATTATGTTAG TGGCGTTAGA TGCCGGCGCT
GTCGATATCG AAAATGATGG CGAAAGCTTA CTTGTCATCA CTGAGCCTGA CACTTTTGGT
GCGGTAAAAG ATGCGTTAGA TGCAGCCGGC TATGAGTCGA GCAATGCTGA GGTTACCATG
TCGCCTTCGA CCACCGCGCT TATCGATAAT ATCGATGATG CCGAAAAAGT GATGAAAATG
ATCGATATGC TAGAAGATTT AGACGATGTA CAAGATGTGC ATACCAACGT CGACTTCACT
GATGACGTAT TAGCGCAGTT AGGCTAG
 
Protein sequence
MAGHSKWANI KHKKAKEDAK RGKIFTKIIR ELVSATKQGD PDPESNPRLR AAVEKALSAN 
MTKDTIKRAI ERGAGNSDGG EMDELTYEGY GVGGVAVLVE TMTDNVNRTV SEVRHAFTKF
SGNLGTAGSV AYLFTKRGEI IFDDVSLEDE IMLVALDAGA VDIENDGESL LVITEPDTFG
AVKDALDAAG YESSNAEVTM SPSTTALIDN IDDAEKVMKM IDMLEDLDDV QDVHTNVDFT
DDVLAQLG