Gene PsycPRwf_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1007 
Symbol 
ID5205548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1197885 
End bp1198679 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content44% 
IMG OID640599228 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_001279907 
Protein GI148652814 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000103446 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTACTT TATCGCTTAC GATTAATAAT AACCTCTATC ACTTCGAGGA CCTTGACCCT 
CGTACCACCT TACTTGACCT ATGTCGTCAT CACCTACAAA TCACCGGACC CAAAAAAGGC
TGTGACCACG GGCAGTGCGG CGCTTGCACC ATACTCATTA ATGGTCAGCG CATTAACAGC
TGCTTAACCT TAGCGGTGAT GCACGAAGGC GATGAGATTA CTACCATTGA AGGTATTGGT
CTGCCAGAGA CGCTCTCTGA TTTACAGCAA GCTTTTAAAG AGCATGATGC CTTTCAGTGT
GGCTATTGTA CGCCCGGTCA AATCTGCTCG GCCACAGCGC TGATTGAGGA AGTCAAACAA
AACTGGCCAA GTTATGTCAC TGAAGATCTA AAAAACCCAG ATGGCGCTTT AATTCAAGAA
GTTGCAGAGC GTATGAGTGG TAATATTTGT CGCTGCTCAG CGTATCCTAA TATTATTAAT
GCCATCTCTG AGGTATTACA AAAGGAGTTA CAAAAACAGG TCAATCAGAG CAAATCGACG
CATCCATCGA GCTTAGATAA CTTAGATAAC TTAGATAACT TACATAACTT ACATAACTTA
CATAACTTAC ATAACTTAGA TAGCTCATTA GACAGTTCAG GCAACCCAAG CAATAAGCCG
GCAGTCTCGG CAGCAGTGAG CGGCATATGG TCGCCACCAC CAAGCCAGTC TCAAGTCCAT
AAAGACCAAG CCCATAAAGA CAATGCCAAT AAAAGCATCA ACAATCAGTC GCAAGCTATA
GGAGAAAACT CATGA
 
Protein sequence
MTTLSLTINN NLYHFEDLDP RTTLLDLCRH HLQITGPKKG CDHGQCGACT ILINGQRINS 
CLTLAVMHEG DEITTIEGIG LPETLSDLQQ AFKEHDAFQC GYCTPGQICS ATALIEEVKQ
NWPSYVTEDL KNPDGALIQE VAERMSGNIC RCSAYPNIIN AISEVLQKEL QKQVNQSKST
HPSSLDNLDN LDNLHNLHNL HNLHNLDSSL DSSGNPSNKP AVSAAVSGIW SPPPSQSQVH
KDQAHKDNAN KSINNQSQAI GENS