| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1004 |
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| Symbol | |
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| ID | 5205545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1194230 |
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| End bp | 1196035 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640599225 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001279904 |
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| Protein GI | 148652811 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000430658 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACGCAC AGAGCTTAAT TAATGAGTTT GAGTTACCCT TTCAGCTTTA CGATGTACTA
AATACCGAGC AATTATGTCA GCACCCTAAA TTCGCTGAAC ATTCACGTGA TACCTTCGAT
GCCACCATCG ATACCGCCAA AAAAATAGCC ACCGATCTCT TCTTACCGCA TAACACAGTC
GCTGATAAAA ACGAGCCACA GTTCGATGGC AAAAAGGTAA CGATGCTCAA TGACGTAAAA
GTAGCCTTTG ATGCTTATCG CCATTCTGGC TTTATCGCCG GCCGCTATGA TTTTGATCAA
GGTGGTATGC AGTTACCTGA GACGGTGATG ACGGCGGTGG CCGGTTACTT TATGGCAGCC
AATCCATCAA CCACTGCTTA TCCATTTTTG ACCACTGCAG CGATTAATGT GTTGATGCAC
TTTGCCAATG ATGAGGTAAA ACAAGCCTTT GTACCACGCA TGCTCAGCGG TGATTTTACC
GGTACTATGG CTTTGACTGA ACCGCATGCC GGATCTTCTC TTGCCGATAT CAGAACCACC
GCCACACCCC ATGATGACGG CACTTATCGT ATCCGTGGTA GCAAGATTTA TATCTCAGGC
GGAGATCATG AGTTAGCTGA AAACATTGTG CATTTGGTGT TGGCTAAAGT GCCAGGCGGT
CCTGCTGGCG TGAAGGGCAT ATCGCTATTT GCGGTACCAA AATACCGCTT GGATGCTAGT
GGCAAACCTG CTGAGCGTAA CGATGTACAT TTGGCCGGTC TAATTCATAA GCTGGGCTAC
CGCGGCACCA CGTCAACGGC GCTTAGCTTT GGCGATGCCA ATGACTGTGT TGGCTATCTG
ATTGGCGAGG TGCATTTTGG CCTACGCTAT ATGTTTAAGA TGATGAATGA GGCACGCATC
GCAGTAGGCT TTGGCGCAGC TATGATTGGC TATCGTGGCT ATCAGTATTC GCTGGCCTAT
GCCAAAGACC GTTTGCAAGG ACGAGTGGCC CCACATCTTA AGCCTGATGA TCCTGCGGCG
GCCATCATCG AGCATAGCGA TGTCAAGCGT ATGCTATTGG CACAAAAGGC CTATAGCGAA
GGCGGCATGG CTTTGTGTCT GTATGGCTCA AATCTCATTG ATCGTATCAA TACCTGCGAT
GATGACACAC AAAAACAAGC CTTGTCTGAA CTGCTGGATT TATTAACCCC TGTCTTAAAA
GCTTGGCCTT CAGAATATGG CCCCAAAGCC AATGATTTAG GTATTCAGGT ATTGGGCGGC
GCAGGCTACA CCCGAGAGTA TCAAGCAGAG CAGTTTTGGC GTGATAATCG TTTAAACCCC
ATTCACGAGG GCACCAATGG CATACAAGCC TTGGACTTAA CTTTCCGCAA ATTATGGCAA
AATCAAGGGC TTGGATTACA GGTATTGCAG CAAGAAATCA CTCGAGACTT GATTGCCATT
TCGACGTCGC AAACCGCGAA GCTTGCTAAC AAATTGCAGA TTTATATCGA ACAGCTGCAG
CCGCTGCTAC AGCATGTGGG TCAAACCCTA AGCACACCAA AAGCTGCCAC CTTGAGTGCC
AATGCACAAG CTTTAATGAC TGTATTTGCC ACTATTGTTA TGAGCTGGAT TTGGATTCGC
CAAGCCAGCA AGGCCGAGCA GCTATTAGCA CTCACTGAAG ATGGCGCTAA GCAAAACTTT
TATCGTGGCA AAATTCAAGC AGCAAAATAC TTCATCGATT GGGAGCTGCC GCTCATCCAG
CGTGATATTG AGCTGCTGAC CACGGACAAT GCGGTGTGCC ACAGCATGCA GCCTGAGTGG
TTCTAA
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| Protein sequence | MDAQSLINEF ELPFQLYDVL NTEQLCQHPK FAEHSRDTFD ATIDTAKKIA TDLFLPHNTV
ADKNEPQFDG KKVTMLNDVK VAFDAYRHSG FIAGRYDFDQ GGMQLPETVM TAVAGYFMAA
NPSTTAYPFL TTAAINVLMH FANDEVKQAF VPRMLSGDFT GTMALTEPHA GSSLADIRTT
ATPHDDGTYR IRGSKIYISG GDHELAENIV HLVLAKVPGG PAGVKGISLF AVPKYRLDAS
GKPAERNDVH LAGLIHKLGY RGTTSTALSF GDANDCVGYL IGEVHFGLRY MFKMMNEARI
AVGFGAAMIG YRGYQYSLAY AKDRLQGRVA PHLKPDDPAA AIIEHSDVKR MLLAQKAYSE
GGMALCLYGS NLIDRINTCD DDTQKQALSE LLDLLTPVLK AWPSEYGPKA NDLGIQVLGG
AGYTREYQAE QFWRDNRLNP IHEGTNGIQA LDLTFRKLWQ NQGLGLQVLQ QEITRDLIAI
STSQTAKLAN KLQIYIEQLQ PLLQHVGQTL STPKAATLSA NAQALMTVFA TIVMSWIWIR
QASKAEQLLA LTEDGAKQNF YRGKIQAAKY FIDWELPLIQ RDIELLTTDN AVCHSMQPEW
F
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