| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0960 |
|---|
| Symbol | |
|---|
| ID | 5204911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 1146044 |
|---|
| End bp | 1147453 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640599179 |
|---|
| Product | adenylosuccinate lyase |
|---|
| Protein accession | YP_001279860 |
|---|
| Protein GI | 148652767 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0015] Adenylosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.000552742 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCCT CTTTATCTGC CTTAACTGCC CTATCTCCGA TTGACGGTCG CTATGCCAGC
CGTGCTGACT CATTACGTGC TCATTTATCA GAGTTTGGCC TTATTAAAGC CCGCGTTACT
GTTGAGATTC GTTGGTTGCA AGCCTTAGCC GATAATGATG CCATCACTGA ATTGGCCAAG
TTTGATCAAG AGACCAATGC CTTTTTGGAC GCCATCGTTG ATAACTTTAG TGAAGACGAC
GCACAAGCGA TTAAAGACAT CGAAAAAACC ACCAACCACG ATGTAAAAGC GGTTGAGTAC
TTCATCAAAG ACAAGTTTCG TGGCAACGCT CAGCTAGAGG ACAGCCTAGA GTTTATCCAC
TTTGCTTGTA CCTCAGAGGA CATTAACAAT CTATCTTATG CGTTAATGCT AAAAGACAGC
CGTGACATCG TGGTTGCCAA ATTGCAACAG GTCACCGACT CTATCGTGGC ACTGGCAAAA
GAACATGCCA ACCAGCCTAT GTTGTCTCGT ACTCATGGTC AGACTGCCAG CCCAACGACT
TTGGGTAAAG AGATGGCTAA CGTGGCCTAC CGCCTAGCCC GTCAAATCAA GCAAATCAAT
CAAGTTGAGC TACTTGGCAA AATCAATGGC GCCGTGGGTA ACTACAACGC TCATTTATCT
GCTTATCCTG AGGTTGATTG GAGCGCACAT GCACAGCAAT TTATCACTGA GCGCTTAGGC
CTTACCTTTA ACCCTTACAC CACTCAGATT GAGCCACACG ACTATATCGC TGAGCTATTT
GATGCGCTGC GCCGTTTTAA TACGGTATTG ATCGATTTTA ACCGTGATAT CTGGCAATAC
ATCAGCTTAG GCTATTTCAA GCAAAAACTT AAAGACGGTG AAGTCGGCTC ATCCACCATG
CCGCACAAAG TTAACCCCAT TGACTTTGAA AACTCTGAAG GTAACTTGGG TGTGGCAAAT
GCCATGCTGG CGCATTTGGG CGAAAAACTG CCTATCTCTC GTATGCAGCG TGACTTATCT
GACTCAACTG TTCTACGTAA CATTGGGGTT GGTCTTGCCC AAGGCATGAT TGCTTATGAT
GCGTGCCTAA AAGGCGTTGG CAAATTAGAA GTCAATCCTG AGAAGCTAGA TAGTGACCTT
GATAACGCTC AAGAAGTGTT GGCAGAGCCT ATCCAAACTG TGATGCGCCG CTACCGTGTT
GAAAACCCAT ACGAGAAGCT AAAAGCGTTA ACCCGTGGTC AGGCCATGAC CCGTGAAAAA
ATGCTTGAGT TTGTTGATAG CAATGAATTA GATGCAGTGC CAGATGCAGA CAAAGCCCGC
TTACGTGAGC TGACCCCTGC CACCTATATT GGTAATGCTG ATGAACAAGC CCTGGCCATC
GATGAGTGGA TTGCCAAGCT AAATAAATAA
|
|---|
| Protein sequence | MSASLSALTA LSPIDGRYAS RADSLRAHLS EFGLIKARVT VEIRWLQALA DNDAITELAK
FDQETNAFLD AIVDNFSEDD AQAIKDIEKT TNHDVKAVEY FIKDKFRGNA QLEDSLEFIH
FACTSEDINN LSYALMLKDS RDIVVAKLQQ VTDSIVALAK EHANQPMLSR THGQTASPTT
LGKEMANVAY RLARQIKQIN QVELLGKING AVGNYNAHLS AYPEVDWSAH AQQFITERLG
LTFNPYTTQI EPHDYIAELF DALRRFNTVL IDFNRDIWQY ISLGYFKQKL KDGEVGSSTM
PHKVNPIDFE NSEGNLGVAN AMLAHLGEKL PISRMQRDLS DSTVLRNIGV GLAQGMIAYD
ACLKGVGKLE VNPEKLDSDL DNAQEVLAEP IQTVMRRYRV ENPYEKLKAL TRGQAMTREK
MLEFVDSNEL DAVPDADKAR LRELTPATYI GNADEQALAI DEWIAKLNK
|
|---|
| |