Gene PsycPRwf_0948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0948 
Symbol 
ID5206365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1131756 
End bp1132586 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content44% 
IMG OID640599167 
ProductRDD domain-containing protein 
Protein accessionYP_001279848 
Protein GI148652755 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000870285 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.142163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATTT ATCTAGCAAG AAACCAAGTT CAGGCGGGTC CTTACACGCT CACAGAGCTC 
AATAATATGC TTGCCACCGG TCAGGTAGAC TTAAGTGATC TGATGTGGCA TGCCGGTATG
GAACAGTGGC AGCAAGTTGG TGAAATGACC CAAGGCAAAA ATCACTACAA CCCAAATGGC
AGCATAAGCT CAGTACCGCC AAAGCGAGTG TCTGTGGCTG AGCTTTATGG CAAAAAAGAG
TCTCATTCGA CTACATCGCC CTCAGGCAAT AAGCCTTTTA ATATCAATAA GCCAGTTAGT
CTAAAAAAAC AGACCGCCAG CATGGCCGCT CCCACACAGC TGGCCAGCAT TAGCAGCCGA
GTTTTTGCGG TACTGCTCGA CGCTTTATTA TTTTTGGCCT GCTACTTACC CTTTTTGTCA
GGCTTAAATT ATGATTTTGC AAAAATTACC GCCACCAATG GCGACATGGA AAAAATGACC
CAATTGGCGC AATCGGTTCC TGAGCATTTA AGCTCAATGA CCTCGATTAT GTTTTTGGCG
CTGTTTGCCA TTCAGCTGAT CTTATTACTA AGACGTGGGC AGACCATTGG TAAATTGGTG
AATGGTATTC GTATTGTTGA TGAGCAGTCA AAAAAACTGG CTTCAGCGAC TCAGGTTATT
TTAATGCGCA GCGTCATTAC GTCAGCACTG TATATTCTAC CCATGGTAGG CCCTATAATT
TTATTGGCTG ATTTTGTGGT GATGACTATA AATAAAGAGC GCCGCAGTAT TCACGATAGG
ATTGCCAAAA CCAGAGTGGT TAAAGCCGAT CCTAAGCAGT TAGAAAAATA A
 
Protein sequence
MQIYLARNQV QAGPYTLTEL NNMLATGQVD LSDLMWHAGM EQWQQVGEMT QGKNHYNPNG 
SISSVPPKRV SVAELYGKKE SHSTTSPSGN KPFNINKPVS LKKQTASMAA PTQLASISSR
VFAVLLDALL FLACYLPFLS GLNYDFAKIT ATNGDMEKMT QLAQSVPEHL SSMTSIMFLA
LFAIQLILLL RRGQTIGKLV NGIRIVDEQS KKLASATQVI LMRSVITSAL YILPMVGPII
LLADFVVMTI NKERRSIHDR IAKTRVVKAD PKQLEK