| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0944 |
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| Symbol | |
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| ID | 5204941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1128491 |
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| End bp | 1129234 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640599163 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001279844 |
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| Protein GI | 148652751 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000217759 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.240259 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCAAC TTCAGCAGTC CAAGTCAATT CTGCAAAACA AACCACAATT AACCCGGCCC
AATTCGCCTA TTATTGTGGC GTTAGATAAA GCCTCTTTGA ATGAAGCCTT GGCTTTGGCC
GATCAGCTGG ATCCTAAGTA TTGCCGCGTA AAAGTGGGTA AAGAGCTGTT TACACGCTGT
GGACCTCAAA TTATCGATGA GTTACATCAA CGAGGCTTTG AGGTGTTTTT GGATCTAAAA
TTCCATGACA TTCCCAATAC CACAGCACAA GCGGTATTGG CAGCAGCAGA TATGGGGGTA
TGGATGGTCA ATGTACATGC CAGTGCTGGT CTTGAAGCGA TGCAGACGGC CAAAGAGCGC
TTGGTAAACG GTGGCCATGA GACGTTATTG ATTGCAGTGA CAGTATTGAC CTCTATGACT
GAGGTGGGGC TGCGTCAGCT GGGGATCGAT GTGCCGGTCA ATGAGCAAGT TGAGCGTTTG
GCGCTGCTGA CTAAAGAGGC GGGACTTGAT GGGGTAGTGT GCTCCGCTCA AGAGGCCAGT
CGTCTCAAAC AGCTTTGTGG GATGGATTTT CAATTGGTGA CCCCAGGCAT CCGTACCCTT
GAGGATGCAG CCGATGACCA AAAACGTATT TGTACCCCAG AGCAGGCTAT GAAAAACGGC
TCAGATTATC TGGTTATAGG CCGCTCTATC ACCCACGCTG ATAATCCCAC CCAAAAGATG
TCACAAATTC TTGATACGTT ATGA
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| Protein sequence | MTQLQQSKSI LQNKPQLTRP NSPIIVALDK ASLNEALALA DQLDPKYCRV KVGKELFTRC
GPQIIDELHQ RGFEVFLDLK FHDIPNTTAQ AVLAAADMGV WMVNVHASAG LEAMQTAKER
LVNGGHETLL IAVTVLTSMT EVGLRQLGID VPVNEQVERL ALLTKEAGLD GVVCSAQEAS
RLKQLCGMDF QLVTPGIRTL EDAADDQKRI CTPEQAMKNG SDYLVIGRSI THADNPTQKM
SQILDTL
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