| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0931 |
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| Symbol | gpsA |
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| ID | 5206240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1113875 |
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| End bp | 1115263 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640599150 |
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| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_001279831 |
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| Protein GI | 148652738 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.191339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGATA ATACCCAAAA ACAACCAGAT GCAGACGCCC AAGAGCATCA AAAATTGAAA
AAGTCGGTAA CGCCCGATGG CTCAGATAGC CATCAGAACA ATCAGAACAA CCAGCCAGAC
GCGGCTCAAG CCGAGCGCCA AAACGAGCAA ACGGGTGCTG AAACCAAAGC TGAAAAGCCG
GTCTTTAATG CTGGTTTATT AAGCAGCTTA TTTGAAAAAG CCACTAAAGT AAGTAAGGCT
AAGCGCACCA CCCAAACCTT AGATCCTACT GTGGTAGAGG AGACGGTGAT GCACAATATG
GCCAAGCCTC AAGGCACTAA GTCGCCACAT ACGCTGCGCT TGGCCTTTTT GGGTGGCGGC
AGCTTTGGTA CCGCTATGTC AAACTTGGCG GCACGTAATG GCTGTGATTC AACGCTTTGG
GTACGCAACA AACGCACGGT TAAGTCGCTA CAAAAAAACC GTGTTAATAA AAAGTATTTA
CCCGGCTATA TTTTGGATGA GCGCTTAAAG TATGAGCATG ATTTAAAGGC GGCGGTACAA
GACAAAGACA TTATCTTCGT GGCGGTACCG AGCTCTGCTT TTAGAGAGAC TTTAAGGAAG
ATTCGTCCTT ATTTAAGTGG TCAGTCGGTG GTTTCGTTGA CCAAAGGTAT GGAGAAAGAC
ACCTTTAGCT TAATGAGTGA CATCATCAGC CAGGAGCTGC CGGAGGTGAA TTTTGGGGTA
ATGTCAGGGC CTAACTTGGC GGTTGAGATT ATGCAAAATA TGCCTTCAGC CTCTGTGATA
GCCAGTGACT CTGAGCCTTT GCGCCATGCT GTACAGTCAG CGCTGCACAG TGCGTTTTTT
AGAGTATTCG CCTCAGATGA TATTAAAGGG GTTGAGCTTG GCGGCGCATT AAAGAATATT
TATGCCATCG CCATGGGTAT GGCGGCCTCC TACAATGTAG GTGAGAACAC CAAGGCCATG
CTATTAACAA GAGGTCTGGC AGAGATGAGC CGCTTTGGGG TGGCATCCGG TGCCAATCCT
CTGACTTTCT TGGGTCTAGC TGGGGTGGGC GACTTATACG CCACTTGTAG CTCGGAGCTA
AGCCGCAACT ATCGTATTGG TAACATGCTC GGCAATGGCA TGAGCTTGGA GGCTGCTATT
AAGAAGCTGG GTCAAACTGC TGAAGGGGTG AACACCATTC AGCAAGTGCA TGAAAAAGCC
ACTAAGCTTG GAATTTATAT GCCCATCACT CATGCGCTGT ATGCGGTTAT CTTTGAGGAT
CAAGCGGCAT TGGGTGTGGC ACTAAATCTG ATGGAATCAG GATTTAGAAG TGATGTGGAG
TTTGTGATGC CGCATGAGTA CAGCAATGAG AGCTTAAATG CCCAAATGAA TGCCACGTCA
AAAAAATAA
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| Protein sequence | MSDNTQKQPD ADAQEHQKLK KSVTPDGSDS HQNNQNNQPD AAQAERQNEQ TGAETKAEKP
VFNAGLLSSL FEKATKVSKA KRTTQTLDPT VVEETVMHNM AKPQGTKSPH TLRLAFLGGG
SFGTAMSNLA ARNGCDSTLW VRNKRTVKSL QKNRVNKKYL PGYILDERLK YEHDLKAAVQ
DKDIIFVAVP SSAFRETLRK IRPYLSGQSV VSLTKGMEKD TFSLMSDIIS QELPEVNFGV
MSGPNLAVEI MQNMPSASVI ASDSEPLRHA VQSALHSAFF RVFASDDIKG VELGGALKNI
YAIAMGMAAS YNVGENTKAM LLTRGLAEMS RFGVASGANP LTFLGLAGVG DLYATCSSEL
SRNYRIGNML GNGMSLEAAI KKLGQTAEGV NTIQQVHEKA TKLGIYMPIT HALYAVIFED
QAALGVALNL MESGFRSDVE FVMPHEYSNE SLNAQMNATS KK
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