| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0872 |
|---|
| Symbol | |
|---|
| ID | 5205745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 1033504 |
|---|
| End bp | 1034307 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640599093 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_001279774 |
|---|
| Protein GI | 148652681 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00607117 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000000775855 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCAG ATAAAGACCG TAACTTTGAT CCCATCACCG AGCATTTTGT CAAAAAAGTC
TATGGCGGCT TAAAAGGGGA GATTCGTCTG GCAGTGCTCA AGCGCGACTT GGCTCAGACA
GTCGAGCAGC TATCCGCTCA GTTAAAGCGG CCGTTAAAAA TACTTGATGT GGGAGCTGGA
TTGGCTCAGT TGTCATTGCA GCTGGCCGCT CAAGGTCACA TAGTTACGAT CAATGACATC
TCAGACAACA TGCTCACTGA GGCCAAAAAA AGTGCTGAAC AATTGGGCGT GTTGACTCAA
GTAATCTGGT TAGTCTGCCC CTATCAACAG CTTGAGGACT TGCTTGGGGA GCACAACAAA
CAAAGCTATG ACTTGATTTT GTGTCATGCG CTGCTTGAAT GGTTGGCTGA GCCGCAACAG
ATTATGCCAT TTTTTGCACA GTGGCTTGCA CCCACCGGCG TACTGTCGCT GTGCTTTTAT
AACCCCGCAA GCTTCATATA CCGCAATCTG ATTATGGGCA ATTTTAACTT GCTCAATAAC
CCCAATTTCA AATCAGACAA CAAAAAAAGC CTGACACCCA ATAACCCCGT CAGCTATGAA
GAAGCTGACG CTTGGCTAAA GGCGCAAGGC TTTATGATTG ATAAAGTAAG CGGGCTGCGT
GTGTTTCATG ACTATGCGCC GCTAAAACGT GGTGGTCACA CCAATCCTGA GGCTGTAATT
GATATGGAGC TGCGCTATTC AGATCAAACC CCTTATAAAT GGCTGGGGCG TTACCTGCAT
GTTCAGGCCT CTTTTGATGC TTAA
|
|---|
| Protein sequence | MSADKDRNFD PITEHFVKKV YGGLKGEIRL AVLKRDLAQT VEQLSAQLKR PLKILDVGAG
LAQLSLQLAA QGHIVTINDI SDNMLTEAKK SAEQLGVLTQ VIWLVCPYQQ LEDLLGEHNK
QSYDLILCHA LLEWLAEPQQ IMPFFAQWLA PTGVLSLCFY NPASFIYRNL IMGNFNLLNN
PNFKSDNKKS LTPNNPVSYE EADAWLKAQG FMIDKVSGLR VFHDYAPLKR GGHTNPEAVI
DMELRYSDQT PYKWLGRYLH VQASFDA
|
|---|
| |