Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0846 |
Symbol | |
ID | 5206260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1000902 |
End bp | 1001525 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640599067 |
Product | HPP family protein+B94 |
Protein accession | YP_001279748 |
Protein GI | 148652655 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3448] CBS-domain-containing membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.164128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTTTT TATTTGATAG GGCCGAAAAA CTACCTGAAA ATGCCAGTGC CATAGATTTA TTACGCTCAT TAATAGGCGG CACCTTAGGG ATTTTAATCC TATTGTTACT TACCCAATAT ACCGGCAACC TAATGATTAT GGCCCCCTTT GGTGCCACCT GCGTCTTACT CTTTGCTGTC TCTCACTCCC CTTTGGCCAA GCCGCGTAAC GTCATATTTG GTCATTTGAT TGCAGCCTTT GTGGGATTGG TATTCTTAAA ATATATTGGC ACCTCTATCT TTGCCATCGC TTTCGCCGTT GGCTTATCGA TCTCATTGAT GCACTATTTT AAATGCATCC ATCCACCCGC TGGCGCCACC ACCTTAGTGG TGCTATTGAC CGCGCAAACC ACGCATTATG ACTGGGGCTT TTTGATCATG CCCGTCTTGG CAGGCTCTGT AGCGCTCATT GTCGTGGCTC TGATTGTGAA CAATATCAAA CCCAATCAAA AATGGCCGGC TTACTGGTTT GCCTTAGTAA AAACCCGCAT TGAACATCAC ATTGAGCATC ATGCAGACAC TCACTTTATC GAAGAGCAAA TTGAGGCACA AAACCCACAA CCTCAAATGC GCCGTCAAGG TTAA
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Protein sequence | MHFLFDRAEK LPENASAIDL LRSLIGGTLG ILILLLLTQY TGNLMIMAPF GATCVLLFAV SHSPLAKPRN VIFGHLIAAF VGLVFLKYIG TSIFAIAFAV GLSISLMHYF KCIHPPAGAT TLVVLLTAQT THYDWGFLIM PVLAGSVALI VVALIVNNIK PNQKWPAYWF ALVKTRIEHH IEHHADTHFI EEQIEAQNPQ PQMRRQG
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