| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0834 |
|---|
| Symbol | |
|---|
| ID | 5206168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 990571 |
|---|
| End bp | 991827 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640599055 |
|---|
| Product | carbamoyl phosphate synthase small subunit |
|---|
| Protein accession | YP_001279736 |
|---|
| Protein GI | 148652643 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
|---|
| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0896746 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGTAC AACAAGACAC AACACACAAT ATCTCTAATG AAGTTGAAGC TATTTTGGCT
TTGGCTGATG GTAATATTTT TCGTGGCATC TCAATTGGTG CAGCAGGTAG CCGCGTAGGT
GAAGTGGTCT TCAATACTTC AATGACTGGG TATCAAGAAA TCCTGACTGA CCCAAGTTAT
GCCAAACAAA TCGTTACCCT AACCTACCCA CACATCGGTA ATACAGGCAC CAACGTTGAA
GATGCCGAAT CTGGCAACAT CTATCAAAAC AACCAAGTTT GGGCAGAGGG CTTAATCATT
CGTGATGCCA CCATGACCAC CTCAAACTTC CGCAATTCAG AAAGCTTAAG CGATTATTTA
CAGCGCCAGC AGACTGTGGC TATCGCTGAG ATTGATACCC GCAAACTGAC CCGTATCCTG
CGTGATAAAG GCGCTCAAAA TGGCTGTATC ATGACTGCCA GCAATGGCGC GACCATCAGT
GAAGAAGATA TCCAAAAAGC CATCGAAATT GCCCAGCAGT GGGAAGGCCT AGAAGGTATG
GACCTGGCCA AAGAGTGCTG CAACCCTGAA GGCTTTGAGT GGACAGAAGG CACTTGGGAG
CTGGCAGACC GCGGCGTACA TGGGGTAACC GAGAGCCAAA CCGGCGGCTA TTACAAAAAG
CTTGGCGAGC ATATTGATCA TCAATATGAC GTGGTGGCTT ACGATTTTGG CACCAAAACC
AATATCCTAC GCATGTTAGT AGATTTGGGC TGTAAAGTGA ATGTGGTACC GGCGCAAACG
CCTATTGCTG ATGTCTTGGC GCAAAACCCA GACGGTATTT TCTTATCAAA TGGCCCTGGT
GACCCTGCCG CTTGTGATTA CGCCATCGAT GCGGTACGTC ACATCATTGA AGAGACAGAC
ATCCCAACCT TTGGTATCTG CTTAGGTCAC CAGCTGGTCG GCCTTGCCAG CGGTGCCAAG
ACCATGAAAA TGAAAACCGG TCACCACGGT GCCAACCACC CTGTACAGGA TTTGGCCAGC
AAAAAGGTGA TGATTACCTC TCAAAACCAT GGCTTTGCCG TAGACGAATC CACCTTACCA
GACAATGTCA AAGCCACGCA CCGCTCATTA TTTGATGGCA CCAACCAAGG TATTGAGCTG
ACCAACAAAC CTGTATTTAG TTTCCAAGGT CACCCAGAGG CAAGCCCTGG CCCTCAAGAT
GCGGCGCCCT TATTTAAGAG ATTTGCTGAC TTAATGCAGC AGAACAAACA GGCTTAA
|
|---|
| Protein sequence | MGVQQDTTHN ISNEVEAILA LADGNIFRGI SIGAAGSRVG EVVFNTSMTG YQEILTDPSY
AKQIVTLTYP HIGNTGTNVE DAESGNIYQN NQVWAEGLII RDATMTTSNF RNSESLSDYL
QRQQTVAIAE IDTRKLTRIL RDKGAQNGCI MTASNGATIS EEDIQKAIEI AQQWEGLEGM
DLAKECCNPE GFEWTEGTWE LADRGVHGVT ESQTGGYYKK LGEHIDHQYD VVAYDFGTKT
NILRMLVDLG CKVNVVPAQT PIADVLAQNP DGIFLSNGPG DPAACDYAID AVRHIIEETD
IPTFGICLGH QLVGLASGAK TMKMKTGHHG ANHPVQDLAS KKVMITSQNH GFAVDESTLP
DNVKATHRSL FDGTNQGIEL TNKPVFSFQG HPEASPGPQD AAPLFKRFAD LMQQNKQA
|
|---|
| |