Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0775 |
Symbol | |
ID | 5206880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 924995 |
End bp | 925495 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640598996 |
Product | protein tyrosine phosphatase |
Protein accession | YP_001279677 |
Protein GI | 148652584 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00021336 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGATGT CAGATGCTAT GCCAAAGTCT GTATTGCTAG TATGTCTTGG GAACATTTGC CGCTCGCCTA CGGCTGAGGG TATCATGAGA CAGCGTACCG CCATTGCTGG GCTTACGATG AAAATCGACT CTGCAGGTAC GGGCGACTGG CACATTGGCA AGCACCCTGA CCCCAGAGCG CAGCTGCATG CTAAGCAGCA CGGCTACAAC ATCAGCAAGC TGGTGGCGCG TCAAGTTAGC CCACAAGATT TTATCGACTT TGACTTAATC TTAGCAATGG ATGCGCAAAA CCTAAAAGAC TTACAAGCCA TTAAAGATCA AGTGTCCCAA AGCACCCCTA CAACAAAACT GGCCGAGCTG GCCTTGATGA GTGAGGTGGA CATCAGCTAC CTTAAGCAAG ATGTCCCAGA TCCTTATTAT GGCGGTAAAG AGGGCTTTGA AGAGGTCATT AAACGCCTAG AATCTTCGGT AGACGCTTGG ATTGTCTCAT GGCAGATGTA A
|
Protein sequence | MPMSDAMPKS VLLVCLGNIC RSPTAEGIMR QRTAIAGLTM KIDSAGTGDW HIGKHPDPRA QLHAKQHGYN ISKLVARQVS PQDFIDFDLI LAMDAQNLKD LQAIKDQVSQ STPTTKLAEL ALMSEVDISY LKQDVPDPYY GGKEGFEEVI KRLESSVDAW IVSWQM
|
| |