| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0770 |
|---|
| Symbol | |
|---|
| ID | 5206875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 919998 |
|---|
| End bp | 921149 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640598991 |
|---|
| Product | DEAD/DEAH box helicase domain-containing protein |
|---|
| Protein accession | YP_001279672 |
|---|
| Protein GI | 148652579 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000481841 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAGT TTATTACCTT TGCTGATTTG TCCTTAAGTG ACAGTATCTT ACGCTCAGTC
AATGACTTAG GTTTTACCGA GTTGACCGGT ATCCAAGCGC AGATTTTACC GCATACGTTA
GCTGGGCAAG ATGCCATTGG TCAGGCACAA ACCGGAACAG GTAAGACAGC CACTTTTTTA
ATTACTATTA TTGAGGCATT ACTAAAGCGC CCATTTGCAG ATGATGAAAT GCGTTATATT
GGCGAGCCAA GAGCGCTGAT TTTGGCACCC ACTCGAGAGT TGGCCAATCA GATCTATGAC
GATGCCATTG CCTTGACTAA ACACACCAGC TTACACAGTG TGTGCGTGAT GGGTGGGATT
GATTATGATA AGCAGATTGC CGCGCTAGAT AAAAGCTATA CCGATATTTT GATTGCCACC
CCCGGGCGCT TGATTGACTT AATTTACAAA GGCCATGTGT TTTTAGATCG TATTGAAGCC
TTTGTCTTAG ATGAAGCCGA TCGTATGCTA GATATGGGTT TTATTCCAGA TATTAAGCGT
TTGATGCGTT ATATGCCGCC CAACACCGAT CGTCAAAGCC TGCTGTTTTC GGCCACCTTT
AACCAAGATG TGATGAATCT AGCCTATCAA TGGCTTATGA ATCCGGTGTT CGTAGAGATT
GAGCCTGAGC ATAAGACCAG TGATTTGGTT GAGCAGCATT TTTATCTGTT GACCGAAGCC
GATAAACATC AAGCATTGAT CCAGATTTTG GCGCAGCCTG AGACAAAAAA GGTGATCGTA
TTTGCCAATC GCAAGGATCA GGTAAAACGC TTATATACCA AGTTAAGCGC GGATCATAAT
GTGGTGATGC TCTCAGGTGA TGTGGATCAA GCCAAGCGTG AGCGTTACTT GGATAAATTT
AAAAATGGCA ATGCTAAGGT ACTTGTGGCG ACTGATGTGG CGGGACGTGG CATTCATGTT
GATGACATCA GCCATGTGGT CAATTACACC TTACCGGATC AGCCCGATGA TTATGTACAT
CGCATCGGCC GTACTGGGCG GGCCGGCCAA AAAGGTATCA GTATTAGCTT TGTTAGTGAA
GATGATGCCT TTAACCTGCC GGCCATTGAA GCGCATTTAG ACCGCCACTT AAAACTTGAG
CAGTGGGGCT AA
|
|---|
| Protein sequence | MDEFITFADL SLSDSILRSV NDLGFTELTG IQAQILPHTL AGQDAIGQAQ TGTGKTATFL
ITIIEALLKR PFADDEMRYI GEPRALILAP TRELANQIYD DAIALTKHTS LHSVCVMGGI
DYDKQIAALD KSYTDILIAT PGRLIDLIYK GHVFLDRIEA FVLDEADRML DMGFIPDIKR
LMRYMPPNTD RQSLLFSATF NQDVMNLAYQ WLMNPVFVEI EPEHKTSDLV EQHFYLLTEA
DKHQALIQIL AQPETKKVIV FANRKDQVKR LYTKLSADHN VVMLSGDVDQ AKRERYLDKF
KNGNAKVLVA TDVAGRGIHV DDISHVVNYT LPDQPDDYVH RIGRTGRAGQ KGISISFVSE
DDAFNLPAIE AHLDRHLKLE QWG
|
|---|
| |