Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0756 |
Symbol | trpA |
ID | 5205743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 901445 |
End bp | 902272 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640598975 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_001279658 |
Protein GI | 148652565 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000897023 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGAA TTGAAAGCAC CTTTGAGACC TTAAAAGCGC AAAACAAAAA AGCCCTAATC CCTTATGTTA TGGCGGGTGA CCCTTCCCCA AATAGCTTCG TGGACTTACT GCATGATTTA GTAAAACATG GGGCCGATAT GATTGAAGTG GGATTGCCAT TTTCAGACCC AATGGCGGAT GGCCCGACTG TGGCATTGGC TGGTGAGCGC GCCTTAGCAG GCGGTACCAG TACCCATCAG GCGCTGGCTA TAGTCAAAAA ATTCCGTGAA CAAGACAGCA GCACGCCCAT TATCTTAATG GGTTATCTCA ATCCGATTGA GATTATCGGT TATGAGGCCT TTATTGCCTT GTGTCACGAA TCAGGGGTCG ATGGGGTGTT GGTCGTGGAT CTACCGCCTG CTGAATCAGG TAATTTTGTT GAGCGCTTGG CGGCTCATGA TATAAATAAG ATTTTCTTAT TATCACCGAC CACCTTGCCT GAGCGCCGTA AGCAAGTAAT GACCCACTGC GGCGGCTATA TTTATTATGT ATCGCTTAAA GGGGTGACCG GCTCAGCAAG CTTAGATACC CAAGCGGTCG GTGAGCAGGT GCAGGCCATC AAGCAAGAAA CCAATTTACC CATCTGTGTC GGCTTTGGTA TCCGCGATGG GCAGTCTGCT GCGGCCATTG GTCAGTATGC AGATGGGGTG ATTGTGGGCA GTGAGCTGGT GAAGAACTTT AGCGGACTGA GCCACACTTC ACGTGCTGAG GATATCGCCA CTGCTCAAGC CAGCATAATG ACCAAAATGG ATGAACTGCG TCAAGCGTTA GACGCCCTAA GTGCTTAA
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Protein sequence | MTRIESTFET LKAQNKKALI PYVMAGDPSP NSFVDLLHDL VKHGADMIEV GLPFSDPMAD GPTVALAGER ALAGGTSTHQ ALAIVKKFRE QDSSTPIILM GYLNPIEIIG YEAFIALCHE SGVDGVLVVD LPPAESGNFV ERLAAHDINK IFLLSPTTLP ERRKQVMTHC GGYIYYVSLK GVTGSASLDT QAVGEQVQAI KQETNLPICV GFGIRDGQSA AAIGQYADGV IVGSELVKNF SGLSHTSRAE DIATAQASIM TKMDELRQAL DALSA
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