| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0737 |
|---|
| Symbol | |
|---|
| ID | 5205950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 878447 |
|---|
| End bp | 879355 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640598956 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001279639 |
|---|
| Protein GI | 148652546 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.000210121 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGATA TTGATGTCAG GCTGTTATTA CTGTTCCAAG CCATCTATCA GCAGAATACC
ATCTCCAAAG CTGCACAAAA GCTGGATATA GGGCAGCCCG CTGCAAGTCT GGGCTTAAAT
AAATTACGCC AGCATTTTGA TGATCCATTA TTTGTGAGAG TGGGCAATCA AATGCAGCCT
ACCCAAACGG CACAAAATTT ATTTCCTTTA GTTAATAATG CGCTGCAGCA TATTCGCGCA
GTTAATGACT ATACACATCA CTTTGAACCA AAAAATTCAT CACGAAGATT TCATATCAGT
ATGACTGATA TCAGTCACAT GATTATTGTG CCTAAATTGA TAAAATATCT AAAACAGCAT
GCGCCTCATA CCAAGCTTGA TATCTCTGCC ATTAATAGCG ACACCCCCTC ACGGATGAGT
AGTGGTGAAA TTGATTTGGC AATTGGTTAT ATTCCACATC TTGAAGCAGG CTTTTTTCAA
CAAACCTTTT TTGAGCAGCA TTATTCGGTA GTGGTCCGTC AAGACCATCC ACGACTCACA
CAAAATACGT TAACACTTGA AGCCTATCAA CAAGAGCAGC ATGCGGACGT GATATCCAGT
GGAACAGGTC ACTATCTTCT TGAAGACCAT TTACGACGGC GACATATAAA ACGTCATATC
GCCATCACCT TACCCACGTA TCTAGGCGTG GGGTTAATTA TTCAACAGAC TGATTTGGTC
GCCACGTTGC CTGATAAATT GGCCAAATTA CTGTTACAAG AAAACCGTCT CCACACTTTG
CCCCTCCCCT TAGACATTCC CAAATATCAG GTAAAGCAGC ACTGGCACGA ACGGATGCAT
GCAAATCCTG ATAATCAGTG GCTAAGACAG GTGTGTTATG CCTTGTTTCA CCAAGATAAT
GACAGCTAA
|
|---|
| Protein sequence | MFDIDVRLLL LFQAIYQQNT ISKAAQKLDI GQPAASLGLN KLRQHFDDPL FVRVGNQMQP
TQTAQNLFPL VNNALQHIRA VNDYTHHFEP KNSSRRFHIS MTDISHMIIV PKLIKYLKQH
APHTKLDISA INSDTPSRMS SGEIDLAIGY IPHLEAGFFQ QTFFEQHYSV VVRQDHPRLT
QNTLTLEAYQ QEQHADVISS GTGHYLLEDH LRRRHIKRHI AITLPTYLGV GLIIQQTDLV
ATLPDKLAKL LLQENRLHTL PLPLDIPKYQ VKQHWHERMH ANPDNQWLRQ VCYALFHQDN
DS
|
|---|
| |