| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0729 |
|---|
| Symbol | |
|---|
| ID | 5205157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 872395 |
|---|
| End bp | 873222 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640598949 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001279632 |
|---|
| Protein GI | 148652539 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0898358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000000465533 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | TTGTTAAAGA ATATATTTCC CCCGAAAATC GTTGACGGCT ATGCAAGTCC ATGGCGTGAT
GGTGGGTATC AGCTCAAGGT TAACGAGCAG AGTGTCGGTA AGGATCGTTA TGAAAAATAT
AAGCACAATG TAGCTCTTCA GAGTATATGG GATAAATGCT TGAAAAAGCA ACAAGACTCA
TATAGTGAAT ATGAGGTGAA ACAAAAGAGT CTTAAATCTG TTAAAACGTA TATAAGCAAT
TTCTATAAAC AGTGTTTTGA AGGTGATCCA TTATTTGCAT TTGTATCGCA GAGCTACTGC
TGTGTTAGAT ATCATCACTG GTATGCGGTA TCAAAAGATT ATCACTTAAA GTTATATCAG
AGCCGTCAGG TCTTATCAAC TAAGGCGTTT GATGAGTTTC AATCAATGGT GATTGATGAC
CTCAAAAATA ATTTTAATAA AGAACGACGT TTTGAAGCGG CCTTTAATAG GTATGTGAAG
TTTATTGATT TTATTAATAA AAATTACCTG CGTAAGCCTT TTTATTATGC ATTACCTCAA
ATCAATAAAC TAAACAAACG AAACGACCTT ATTATTCCAG CTAACTGGAT TGCCGACAAT
AAACACATTT ATCAGATAGT TGAGTTGGTA ATAGAATACT GGGGAAAGAG AAGACTAGAT
TCTGAGGAGG AAATAATAGC GAGCTTGTTG TTCTCAGGCA TTTTTTTTGG AGGAATAAAT
GACAAAACAT GGCTGTTGTC GTGGCTAACT CAGTGTCTTA ATAATAACTT ACAGCCATTC
ATAGACCACA CTTTGCAAAT TACTATTAGA TATAGAAGCT TTAAGTGA
|
|---|
| Protein sequence | MLKNIFPPKI VDGYASPWRD GGYQLKVNEQ SVGKDRYEKY KHNVALQSIW DKCLKKQQDS
YSEYEVKQKS LKSVKTYISN FYKQCFEGDP LFAFVSQSYC CVRYHHWYAV SKDYHLKLYQ
SRQVLSTKAF DEFQSMVIDD LKNNFNKERR FEAAFNRYVK FIDFINKNYL RKPFYYALPQ
INKLNKRNDL IIPANWIADN KHIYQIVELV IEYWGKRRLD SEEEIIASLL FSGIFFGGIN
DKTWLLSWLT QCLNNNLQPF IDHTLQITIR YRSFK
|
|---|
| |