Gene PsycPRwf_0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0720 
Symbol 
ID5206645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp861737 
End bp862717 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content47% 
IMG OID640598941 
ProductAraC family transcriptional regulator 
Protein accessionYP_001279624 
Protein GI148652531 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.6714e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCAAA AATATGCTAT TGAAATCGGC TTAATTGTCT ATGAGAAAGC ACAAATGGCG 
GCCATCCTTG GGCTGACTGA TTTACTGATG GTGGCCAGTA AAATCGCTGC CGAACGTCAA
GATACAACCG ATCTGCCTTT ACAGGTCAGT CACTGGGAGA TTACGGGTTC TGAGCAGCAG
CCTACCTGCA CTTTTTCGAG CAATCCCGAT AGTGTAGGAA AATTAAAAGC CGTCATCATT
CCACCCACGT TAGAGGCGCC TACTGCAAAG CAAGCAGCAG CACCTTGGCT TGAATGGCTA
AAAGAGCATC ATTCAGGAGG TGTGATAATG TCATCTGTTT GCGCCGGTGC TTTTTTGTTG
GGCGAAACAG GACTACTATC TAAGCGCAAG GCGACTACGC ATTGGGGTTA TGCAGAGGAT
TTTAAGCAGC GCTTTTCTGA TGTGGATCTT GATGTGGATC GCATTATTAT CGAAGACGGC
GATATTGTGA CCGCTGGTGG CGCGATGGCT TGGACAGATT TAGGACTTAG AATGGTAGAT
CGCTTTCTTG GCTCACAAGT GATGAATGAG ACCGCTCGTG CATTGTTAAT TGACCCCTCA
AGGCGTGAAC AATGCTATTA CAGTGCGTTC TCACCCAACC TCACCCATGG TGACGCGGCC
ATACTAAAGG TGCAGCATTG GCTACAAAAA ACAGAGGCAC AGGATATTGA TTTATCCACC
CTAGCTAATT GTGCACAGTT AGAGGAGCGT ACTTTTCTGC GCCGTTTCCA TAAGGCGACG
GGCATGACAT CAACGGAATA CTGTCAGCGA TTACGCATCG GAGAGGCAAA AGATTTTCTA
CAGTTCTCTT TAACGCCTGT TGAGCAAATT GCGTGGAAGG TGGGTTATAG TGATGTCAGT
GCGTTTCGTA AGATATTTAA GCGCATTGTT GGTTTGACCC CTAGCGAATA TCGGCGCAGA
TTCAATACAA ATAAAGCGTG A
 
Protein sequence
MNQKYAIEIG LIVYEKAQMA AILGLTDLLM VASKIAAERQ DTTDLPLQVS HWEITGSEQQ 
PTCTFSSNPD SVGKLKAVII PPTLEAPTAK QAAAPWLEWL KEHHSGGVIM SSVCAGAFLL
GETGLLSKRK ATTHWGYAED FKQRFSDVDL DVDRIIIEDG DIVTAGGAMA WTDLGLRMVD
RFLGSQVMNE TARALLIDPS RREQCYYSAF SPNLTHGDAA ILKVQHWLQK TEAQDIDLST
LANCAQLEER TFLRRFHKAT GMTSTEYCQR LRIGEAKDFL QFSLTPVEQI AWKVGYSDVS
AFRKIFKRIV GLTPSEYRRR FNTNKA