| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0713 |
|---|
| Symbol | |
|---|
| ID | 5206314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 854282 |
|---|
| End bp | 856900 |
|---|
| Gene Length | 2619 bp |
|---|
| Protein Length | 872 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640598934 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_001279617 |
|---|
| Protein GI | 148652524 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0185288 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATA TTGCCGATGA AAAATCTATC AAAGGTGGTC AGTACGATAA AGTGCCAGAA
AACTATAGTG GTACGGTTTA TATCTGCCCG ATGCATCCTG AGGTTAGAGA TACTGAGAAG
AGCGATTGTC CGATATGCGG CATGTTTCTC AAACCTAAAG ACGAGGTTGC TGAATCCAAC
AATAATGAGG GCAGTCATGC GCATTGTCAT AAAGCGGATG CTAATAATAG TACTGAGTTA
AAGTCTGTCG AAGGCAATAA GTACGACAAG ATACCAGAAA ATTATAACGG CACGATTTAT
ATTTGTCCTA TGCATCCAGA AGTAAGAGAT GTTGAAAAAA GTGACTGCCC AATATGTGGC
ATGTTTCTTA AACCTGAAGA CGAAGTTGCT AAAGATGATA GTCACGCCAG TTGTCATGGA
AAGGATACTG ATAGTAGCGG AGTAAAATCT GTTAAAGGCG GTAAATACGA TAAAGTACCT
GCTGATTACG ATGGCACGGT ATATACCTGT CCTATGCATC CTGAAGTGAG AGACGTTAGA
AATAGCGGTT GTCCGATATG TGGTATGGCG CTTGAGCCCG AAACGCTTAC TATCGGTGAA
GAGGACACCT CAGAGCTTGA CGACATGACT CGTCGTTTTT GGATATGTAC CGTGTTGACT
GTACCGCTAT TAATATATGT GATGAGCGGT ATGTTTGACT TAAACGTAGT TAATTTTAGT
CAGTATGGTA TCTCTTCAAA GATCTTACAA TGGGCTGAGT TAGTGCTCGC GACCCCTGTA
GTGCTTTGGG GCGCCGCCCC GTTTTTCGTC CGTGGCTGGC AGTCTATAAA AAGCCGCAAT
CTAAATATGT TTACCTTGAT TGCGATAGGC GTAGGCGCTG CTTATATTTT TAGTATTGTC
GCGACCTTTT TCCCCGATAT TTTCCCAGAC AGTTTCAGAG ATGCCTCTGG TCAAGTCGGA
GTCTACTATG AAGCGGCAGC GGTCATTGTG ACCTTGGTGC TACTGGGTCA AGTATTAGAG
CTCAAAGCTA GAAGTCAAAC TTCAGGTGCG ATTAGAGCTT TGCTTGAGCT CGCACCACCA
ACCGCAAGAC GTGTCGATGA AAACGGTGAA GAAGTCGAAG TCTCGCTTGA TGAGGTCGTC
ACTGGCGATA AGCTACGGGT TAAACCAGGT GAGAAACTAC CCGTAGATGG TACAGTGATC
GATGGTAATA GTAATGTTGA TGAATCAATG GTGACGGGTG AGCCAATCCC TGTATCAAAA
GTAGCAGGAG ATACAGTGAC TGGTGGTACG GTAAATGGCA CCGGAACGCT ATTAGTCGAA
GCGGTCAATG TTGGAGCAGA TTCAGTATTA TCTAAAATTG TACAAATGGT TGCTGAAGCC
CAGCGTAGCC GCGCGCCTAT CCAGCGCTTG GTAGATCAAG TGGCGGGTTG GTTCGTACCT
ATTGTTATTG TCAGCTCTAT CATAACCTTT ATTGTCTGGG CGATATTCGG CCCTGAGCCC
GCTATGACCT ATGCTTTGGT TAACGCGATT GCGGTACTGA TTATTGCTTG TCCTTGTGCC
CTTGGTCTAG CGACGCCGAT GTCCATTATG GTTGGTACCG GCAAAGGCGC GCAAAACGGC
GTCCTCATCA AAAATGCTGA AGCGTTAGAG AGTATGGAAA AAGTCGATAC CATTGTCGTC
GACAAGACCG GAACACTGAC CGCTGGTAAG CCCGAGCTTA CCGCAATTGA TGCGCAGGTA
GGTCAAGATG AAGACGAGTT CCTCGCATTG GTAGCCTCAG TAGAAAGCGC TAGCGAGCAT
CCTTTAGCAG AAGCTATCGT TAGAGCAGCT CAAGAAAGAT CACTCATTAT TCCTAAAGCT
ACTGACTTTA ATTCGACTAC TGGCGAAGGC GTACAAGCCG TGGTCGATGG TAAGAAAGTC
GCTATTGGTA ACTCTAAGCT TATGGAAAGC CTAAATAGTT TTGATAATGA GCTGTCCACT
AAAGCTGATG TCCGTAGAAA AGACGGTGAA ACGGCAATGT TTGTGGCTAT AGACGGTAAA
GCTGCTGGTA TTATTTCAGT TGCTGACCCT ATTAAACCAA GCACTAAAGA GGCTATTTCA
CTGCTTCATG ACGCAGGTTT AAAAGTTGTG ATGCTAACCG GTGACAACGA AAAAACCGCG
CAGGCAGTCG CCAATAAACT AGGTATTGAT GAAGTTCATG CGGATGTCTC ACCAGAGGAT
AAAAACCGTA TCGTCAAAGA AATGCAAGAC AGCGGTAAAT TGGTCGCTAT GGCGGGTGAT
GGTATCAACG ACGCACCAGC GCTAGCGCAA GCTAATGTTG GTATCGCTAT GGGAACCGGT
ACCGATGTGG CGATGGAGAG TGCGGGCATT ACCCTGCTAA AAGGTGATTT AATGGGCATT
GCCAAAGCTT ATAAGCTTAG CCACGCCACC ATGCGCAATA TCAGACAGAA TCTGTTTTTT
GCCTTTATCT ACAATGCACT TGGTGTTCCT ATTGCCGCAG GTGTGCTCTA TCCCATATTT
GGGCTTCTGC TCAGTCCGAT GATAGCAGCG GCAGCGATGA GCTTGTCGTC ATTCTCGGTG
ATTGCTAACG CGCTGCGATT GCGCCGTTTG AAACTATAA
|
|---|
| Protein sequence | MKHIADEKSI KGGQYDKVPE NYSGTVYICP MHPEVRDTEK SDCPICGMFL KPKDEVAESN
NNEGSHAHCH KADANNSTEL KSVEGNKYDK IPENYNGTIY ICPMHPEVRD VEKSDCPICG
MFLKPEDEVA KDDSHASCHG KDTDSSGVKS VKGGKYDKVP ADYDGTVYTC PMHPEVRDVR
NSGCPICGMA LEPETLTIGE EDTSELDDMT RRFWICTVLT VPLLIYVMSG MFDLNVVNFS
QYGISSKILQ WAELVLATPV VLWGAAPFFV RGWQSIKSRN LNMFTLIAIG VGAAYIFSIV
ATFFPDIFPD SFRDASGQVG VYYEAAAVIV TLVLLGQVLE LKARSQTSGA IRALLELAPP
TARRVDENGE EVEVSLDEVV TGDKLRVKPG EKLPVDGTVI DGNSNVDESM VTGEPIPVSK
VAGDTVTGGT VNGTGTLLVE AVNVGADSVL SKIVQMVAEA QRSRAPIQRL VDQVAGWFVP
IVIVSSIITF IVWAIFGPEP AMTYALVNAI AVLIIACPCA LGLATPMSIM VGTGKGAQNG
VLIKNAEALE SMEKVDTIVV DKTGTLTAGK PELTAIDAQV GQDEDEFLAL VASVESASEH
PLAEAIVRAA QERSLIIPKA TDFNSTTGEG VQAVVDGKKV AIGNSKLMES LNSFDNELST
KADVRRKDGE TAMFVAIDGK AAGIISVADP IKPSTKEAIS LLHDAGLKVV MLTGDNEKTA
QAVANKLGID EVHADVSPED KNRIVKEMQD SGKLVAMAGD GINDAPALAQ ANVGIAMGTG
TDVAMESAGI TLLKGDLMGI AKAYKLSHAT MRNIRQNLFF AFIYNALGVP IAAGVLYPIF
GLLLSPMIAA AAMSLSSFSV IANALRLRRL KL
|
|---|
| |