Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0686 |
Symbol | |
ID | 5204778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 829315 |
End bp | 830508 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640598907 |
Product | phage integrase family protein |
Protein accession | YP_001279590 |
Protein GI | 148652497 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0848514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGCTA GCATTAGAAG CAGAAATAAG AGGCTTATAG TCGATTTTTA TTATATGGGC AAACGCTGTC GGGAGACGAC AAACCTGATA GATACTCCGG CAAATCGTAA AAAGCTTGAA AGTATTATTT TGAATATGGA AGCCGAAATT AGGTTAGGTA TTTTTAATTA TGCTAAATAC TTTCCGAAAA GTGATAAGGC TGCAGAAATG GTGGCTTTGA ACGATCGTAA GGAATGTATT AATACCAACG TTCCTTCCTT CAAGCAGTTC GCAACACTGT GGTTTTCTGA AAAAGAAATT GAGTGGCGCG ATACTTACAA GCGCAAAATA CAGGAGATTA TTGATATGTA TTTGCTTCCT GAGTTTGGTA CTAAACCCAT TCATCTCATA AAAAAGACAG ATGTATTAGC CTTCCGTTCA TCGCTCGGCA AAGTAACGTA CGGAAAAGCT AACAAACATC TGTCAGCGGC ACGCATCAAT TCTATAATGG TACCTTTAGG TATGATACTA AAAGAAGCCG CTAAACGCTA TAAGTTTGAT AACCCTTATT ATGATATCAA GGCACTCAAA CAGCCTAAAA CTGATATTCA GCCTCTCACA CTGGAGGAGG TTTGGACGTT TATTAATGGC GTGAGGGAGG ATTATCGCCA TTATTATCTG GTGCGATTTT TTACAGGTAT GCGTACTAGT GAGATTGATG GGCTGACATG GGATAACGTT GATTTTAATC GTCGTGAAAT TGTCATTAAG CAGGCGTTAG TCAAAGGCAA GATTGTTCCT CCTAAAACAC AGGAGTCTTA TCGTGCTATT CAGATGTCTC CATGGGTCTA TGATGCGCTG AAAGAGCAAA AAGAAATCTC CTATAGGCGT TCGGATTATG TGTTTTGCTC ACATACGGGT GAGCCATTGG ATTATAACAA TGTGAATAAG CGTATTTGGC ATCCCACACT TAAAGTTTTA CGGTTGAAGA AGCGTAACGC CTATCAAACA CGCCATACGG CAGCGACTTT GTGGTTGGCG GCAGGTGAGA GTCCTGAGTG GATAGCCAGT CAAATGGGGC ACTCAACGAC TAAGATGTTA TTTAACACTT ATAGTCGCTA TGTACCAAAT ATGACACGGC AGGATGGTAG CGCTTTTGAG GCGCTCGTAA ATCGAAGCCA GATGGCTCAA TTATCTACTG ACAAGGAGAC GTAA
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Protein sequence | MMASIRSRNK RLIVDFYYMG KRCRETTNLI DTPANRKKLE SIILNMEAEI RLGIFNYAKY FPKSDKAAEM VALNDRKECI NTNVPSFKQF ATLWFSEKEI EWRDTYKRKI QEIIDMYLLP EFGTKPIHLI KKTDVLAFRS SLGKVTYGKA NKHLSAARIN SIMVPLGMIL KEAAKRYKFD NPYYDIKALK QPKTDIQPLT LEEVWTFING VREDYRHYYL VRFFTGMRTS EIDGLTWDNV DFNRREIVIK QALVKGKIVP PKTQESYRAI QMSPWVYDAL KEQKEISYRR SDYVFCSHTG EPLDYNNVNK RIWHPTLKVL RLKKRNAYQT RHTAATLWLA AGESPEWIAS QMGHSTTKML FNTYSRYVPN MTRQDGSAFE ALVNRSQMAQ LSTDKET
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