| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0638 |
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| Symbol | groEL |
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| ID | 5206380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 768315 |
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| End bp | 769961 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640598854 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_001279543 |
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| Protein GI | 148652450 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00311247 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAAG ACGTAAAATT TGGCATTGAC GCTCGTAAAC AAATGATGGA CGGCGTTAAC
GTTCTAGCAA ACGCTGTAAA AGTAACCCTA GGTCCTAAAG GCCGTAACGT GGTTATCGAT
AAATCTTTTG GCGCCCCTGC CATCACTAAA GATGGTGTTT CTGTTGCTAA AGAAATCGAA
CTTGAAAACA AATTTGAAAA CATGGGTGCT CAGCTGGTAC GTGAAGTGGC GAGCAAAACC
AATGATGTGG CCGGTGACGG TACCACGACT GCAACTGTAT TGGCTCAAGC TATTCTTGTT
GAAGGCATGA AATCTGTTGC TGCTGGCATG AACCCAATGG ATCTTAAGCG CGGTATCGAT
AAAGCAGTTG CTGCTGCGGT TGAAGAGATC CACAACATCT CTACCCCAGC TGATGACTCT
AAAGCCATTG CTCAAGTGGG CTCTATCTCT GCTAACTCTG ACACCAAAAT TGGTGAGCTA
ATCGCTGAAG CCATGGACAA AGTGGGCAAA AAAGGCGTTA TCACCGTTGA GGAAGGGTCA
GGCTTTGAAG ACTCATTAGA AGTGGTTGAA GGCATGCAGT TTGACCGTGG CTACATCAGC
CCATACTTTG CAAACAAGCA AGACAGCCTA ACTGCTGAAT TTGAAAACCC ATACATCCTA
CTTGTTGACA AAAAAATCAG CAATATCCGT GAAATCGTGC CATTACTTGA GCAAGTAATG
CAGCAAAGCA AGCCACTGTT AATCATCGCT GAAGATGTTG AAAACGAAGC GTTGGCTACT
TTAGTTGTGA ACAACATGCG CGGTGGTCTA AAAACTTGTG CCGTGAAAGC CCCAGGTTTT
GGCGATCGTC GTAAAGCCAT GCTACAAGAC ATCGCTATCT TAACTGGTGG TACGGTGATT
TCTGAAGAAG TGGGCATGAG CCTTGAAACA GCAACCATTG AGCAACTAGG TACCGCTAAG
AAAGTAACCG TTGGTAAAGA AAACACGGTT ATCGTTGATG GCGCTGGCAA CAAAGCTGAT
ATCGAAGCGC GCGTTGAGTC AATCAACCGT CAAATCGAAG AGTCAACTTC TGATTACGAC
AAAGAAAAAC TACAAGAACG TGTTGCTAAA CTTTCAGGTG GCGTAGCAGT TATCAAAGTA
GGTGCAGCGA CTGAAACAGC AATGAAAGAG AAGAAAGACC GTGTTGACGA TGCGCTACAC
GCGACTCGCG CTGCTGTAGA AGAAGGTGTT GTGCCTGGCG GTGGTGTGGC TCTAGTACGT
GCATTGAACG CACTTGCTGA CCTAAAAGGC GACAACGAAG ACCAAAACGC AGGTATCAAC
ATTCTACGCC GTGCGATGGA AGCGCCTCTA CGTCAAATCG TAACCAACGC TGGCGATGAA
GCTTCTGTTG TGGTTAACGA AGTGAAAAAT GGTTCTGGCA ACTACGGCTA CAACGCTGCA
ACTGGCGTCT ATGGCGACAT GCTAGAGATG GGTATCCTTG ATCCTGCTAA AGTATCTCGT
TCAGCACTAG AGCATGCTGC CTCAGTAGCT GGCTTAATGC TGACCACTGA AGCGATGATC
ACTGATAAGC CACAAAGTGA TGACCCAATG GCAGGCATGG GCGGCGCTGG TATGGGCGGC
ATGGGTGGTA TGGGCGGCAT GATGTAA
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| Protein sequence | MAKDVKFGID ARKQMMDGVN VLANAVKVTL GPKGRNVVID KSFGAPAITK DGVSVAKEIE
LENKFENMGA QLVREVASKT NDVAGDGTTT ATVLAQAILV EGMKSVAAGM NPMDLKRGID
KAVAAAVEEI HNISTPADDS KAIAQVGSIS ANSDTKIGEL IAEAMDKVGK KGVITVEEGS
GFEDSLEVVE GMQFDRGYIS PYFANKQDSL TAEFENPYIL LVDKKISNIR EIVPLLEQVM
QQSKPLLIIA EDVENEALAT LVVNNMRGGL KTCAVKAPGF GDRRKAMLQD IAILTGGTVI
SEEVGMSLET ATIEQLGTAK KVTVGKENTV IVDGAGNKAD IEARVESINR QIEESTSDYD
KEKLQERVAK LSGGVAVIKV GAATETAMKE KKDRVDDALH ATRAAVEEGV VPGGGVALVR
ALNALADLKG DNEDQNAGIN ILRRAMEAPL RQIVTNAGDE ASVVVNEVKN GSGNYGYNAA
TGVYGDMLEM GILDPAKVSR SALEHAASVA GLMLTTEAMI TDKPQSDDPM AGMGGAGMGG
MGGMGGMM
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