Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0619 |
Symbol | |
ID | 5206429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 742552 |
End bp | 743580 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640598835 |
Product | thioredoxin reductase |
Protein accession | YP_001279524 |
Protein GI | 148652431 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase |
TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000125941 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.227908 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAAG AGAACACCTC ACCTCGTCAC GAAAAACTCA TTATCTTAGG CTCAGGCCCT GCCGGCTATT CAGCTGCTGT TTATGCAGCG CGCGCTAACT TAAAGCCTGT CATCATTTCA GGCATGCAGA TGGGCGGTCA GTTAACCACC ACCACTGAGG TAGACAACTG GCCAGGCGAT GCCGAAGGTC TCACCGGCCC TGACTTAATG GTGCGTATGA AAGCACACGC TGAGCGCTTT GGTACTGAGA TTGTCAATGA CCATATCAAT TCGGTCACCC TAACTGAGCG ACCATTCACA CTTGAGGGCA ACTCAGGTAC CTACACCTGT GATGCGCTCA TTATCGCTAC TGGTGCGTCA GCTCAGTATT TGCAATTAGA ATCTGAGACT AAGTTTAAAG GTTTGGGGGT ATCCGCTTGT GCCACCTGTG ATGGATTTTT TTATAAAAAC CAAAAGGTTG CGGTGATTGG TGGCGGTAAT ACTGCGGTAG AAGAAGCCCT TTATTTATCC AACATTGCCA AAGAGGTAGT CTTAGTTCAC CGCCGTGACA GCCTGCGCTC TGAGAAAATC TTACAAGACA AATTGTTCGA AAAAGCCAAA AACGGCAACG TCAGCATCGA ATGGAACCAC CAAGTCAAAG AAGTGGTCGG TGATGACATG GGCGTAAACG GTATCATCAT TGAATCCACT AAAGATGGCA GTACTAAGCA GCTGGACGTT ATGGGTATGT TCGTGGCCAT CGGCCATAAG CCCAATACCG ATATGTTCGT CGGTCAGCTA GAGATGAAAG ATGGGTACAT TACGGTCAAC AGCGGCACCA AAGGCAATGC CACTCAGACC AGTGTCGAAG GGGTTTTTGC GGCAGGTGAC GTGGCAGATA ATGTCTATCG TCAAGCCATT ACTTCTGCCG GTACAGGCTG TATGGCAGCT TTAGATGCTG AAAAATACTT AGATTCAATC GGTGTGGCCA CTGCCACAGA ACACACCTAT GATTCAACCT TAAGCGCAGA TGCCAACGCC AATCTGTAG
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Protein sequence | MTQENTSPRH EKLIILGSGP AGYSAAVYAA RANLKPVIIS GMQMGGQLTT TTEVDNWPGD AEGLTGPDLM VRMKAHAERF GTEIVNDHIN SVTLTERPFT LEGNSGTYTC DALIIATGAS AQYLQLESET KFKGLGVSAC ATCDGFFYKN QKVAVIGGGN TAVEEALYLS NIAKEVVLVH RRDSLRSEKI LQDKLFEKAK NGNVSIEWNH QVKEVVGDDM GVNGIIIEST KDGSTKQLDV MGMFVAIGHK PNTDMFVGQL EMKDGYITVN SGTKGNATQT SVEGVFAAGD VADNVYRQAI TSAGTGCMAA LDAEKYLDSI GVATATEHTY DSTLSADANA NL
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