Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0584 |
Symbol | |
ID | 5205147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 703692 |
End bp | 704402 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640598799 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_001279489 |
Protein GI | 148652396 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.821706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCA CCCAATCAGC AGCTACCCCA CGTGAGTATC TAATAGCCCC CTCCATTCTT TCTGCAGATT TTGCCCGCTT GGGTGAAGAG GTAGAGACGG TATTGCAAGC TGGGGCCGAT GTGATTCACT TTGATGTGAT GGACAACCAC TATGTGCCAA ACCTCACCTT CGGCAGCATG ATTTGTAAAG CACTGCGTGA TTACGGCATC GACGCGCCCA TCGATGTGCA TTTAATGGTA TCACCGGTTG ACAGTATGAT TGAGCAGTTC TTAGAGTCCG GTGCCAGTAT CATCACCTTC CACCCTGAAG CAAGCAATCA CATCGACCGC TCATTACAAA TGATCAAAGA TGGCGGTGCA AAATGTGGTT TGGTATTAAA CCCAGCCACG CCGCTGCATT ATCTAGATTA TGTGATGGAT AAAGTGGATC AAATCTTATT GATGAGCGTC AACCCAGGTT TTGGTGGTCA GTCTTTTATT GACGGTACGT TAGACAAGAT CAAACAAGTG CGTCAGCGTA TCGATGCCAG CGGTCGTGAC ATTCGTCTAG AAGTAGATGG CGGCGTAAAA GCCAATAACA TTAGAGCCAT TGCTGAAGCG GGCGCTGATA TGTTTGTGGC AGGCTCAGCC ATTTTTAATC AGCCAGACTA TAAACAGGCT ATTGATGAGA TGCGCCATGA GCTAAGTCTA GTGGGTGCCC ATCAAGCCTA G
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Protein sequence | MSSTQSAATP REYLIAPSIL SADFARLGEE VETVLQAGAD VIHFDVMDNH YVPNLTFGSM ICKALRDYGI DAPIDVHLMV SPVDSMIEQF LESGASIITF HPEASNHIDR SLQMIKDGGA KCGLVLNPAT PLHYLDYVMD KVDQILLMSV NPGFGGQSFI DGTLDKIKQV RQRIDASGRD IRLEVDGGVK ANNIRAIAEA GADMFVAGSA IFNQPDYKQA IDEMRHELSL VGAHQA
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