Gene PsycPRwf_0579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0579 
Symbol 
ID5204514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp696071 
End bp696883 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content53% 
IMG OID640598794 
Producthypothetical protein 
Protein accessionYP_001279484 
Protein GI148652391 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0365953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.114507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCAT ATTATCAGTG CATCAGCCGT GAACAGCAAC AAGACGGCAG CTGCACAGCG 
CATTACCAAC CTACCACCCA TGCGCAAGGG GCATGGAATG AGCACGAGCA GCACATGGCT
CCAGCCACCG GTATTTTGGC GCATGAGCTT GAGGTTTTTG CGCCTCAGCC GCATCTGCGT
ATTGCGCGCA TAAGCCTTGA TATCTTGGGT TTAATTCCCT TACAAGCGTT TAGTATTACC
ACTCGCAGCA TCCGCCCAGG CAAAACCATC GAGCTTATTG AGGCGGTGAT GAGTAGTGGG
GGTCGTGATT GTATTATCGC CAGAGCTTGG CGGCTGATTA GCCAAGACAC CTCAAATATT
GCCGGTCTTG AGGACCACGC ACTGACAGCG TCACCAGAAT CTTTACCCAT TTGGCCAGGC
ATGAGTATTT GGCCAGGTGG GTTTATTGCC AGTACCACAG CGGTCTCAGA TCCTGAGCGT
CGTCCGGGCA AAGGCGTGGT CTGGTTGACC ACCGCTTATG ATATGGTCGA GGGCGAGGCC
ACAACCGACT TTGTGCGCTT AATGGGGCTG GTGGATACTG CCAATGGTGT GGTCCCTCGT
AATGGCTTAC AGCTTGCCGA AACCAAATTG GCTTTTCCCA ATACCGACCT ACAAATTCAC
ATGCACCGCC TGCCTGAGGG CAAATGGTTG GGGATTGAGG CGGTGCAGCA ATACGGTGCT
GATGGCATTG GCTTAACCAG TGCAGTGTTG CATGATAAGC GGGGACCTTT TGGTCGCAGT
GAGCAGATCT TGACCTTGCG GCCCATGGTA TAG
 
Protein sequence
MTSYYQCISR EQQQDGSCTA HYQPTTHAQG AWNEHEQHMA PATGILAHEL EVFAPQPHLR 
IARISLDILG LIPLQAFSIT TRSIRPGKTI ELIEAVMSSG GRDCIIARAW RLISQDTSNI
AGLEDHALTA SPESLPIWPG MSIWPGGFIA STTAVSDPER RPGKGVVWLT TAYDMVEGEA
TTDFVRLMGL VDTANGVVPR NGLQLAETKL AFPNTDLQIH MHRLPEGKWL GIEAVQQYGA
DGIGLTSAVL HDKRGPFGRS EQILTLRPMV