| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0526 |
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| Symbol | ddl |
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| ID | 5205497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 628973 |
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| End bp | 629971 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640598741 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001279431 |
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| Protein GI | 148652338 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000337974 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000125004 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCCATGA CTATGACTCA ATCTGCTACC AACCCAACTG CAACCCCTGT ATCTGCTAAC
AAAGCTTCTG CTAACGCCGC CACGACTCAA GATCCAAGCA TCTTTGGTAA GGTCGCCGTG
GTCTTTGGGG GTAATAGCAA TGAGCGAGCA GTGTCATTAG ACAGTGGCAA TGCGGTATTA
CAGGCGCTAC AGTCACAGGG CATCGATGCC ACTCACTTTG ACCCTAAAGA CCAAGATGTG
ACTGAATTAA AAAATTACGA CCGTGTATTT AATGTGCTAC ATGGCCGCGG CGGTGAAGAT
GGTCAGTTAC AAGGCCTGTT AGATTGGCTG GGTCTACCCC AGACAGGATC CGGTGTTTTG
GCATCAGCGA TTGGTATGGA CAAAGTACGT ACTAAGCAAT TGTGGCACGG CTGTGGATTA
TCTACTGCGC CTTTTGCAGT CTTGGGCGCT GACACAGACT GGCAGCAAAT CGTTAATACT
TTGGGTCTGC CTTTAATTGT AAAGCCAGTG CATGAAGGCT CAAGTATTGG TATGAGCAAG
GTGAATACGT TAGATGAGCT GCCAAAAGCC TATGAAGTGG CAGCAGGGTG TGGTGATGTG
GTGATGGCAG AAAAATGGAT TACTGGCCGT GAGTTTACCA TCGTTATTAT CGATGATGAG
GCTTATCCAG TTATTCGCCT GCAGCCTGCC GACATCTCTA ATTTCTACGA CTATGAGGCC
AAATACAATC GTAACGATAC TCAGTACCAT ATTCCTTGTG GCTTAAGCGC AGAAGAAGAA
GCACATTTAC AGGCACTAAG CTTGGCGGCA TTTAAGGCAG TAGACGCCAA AGGCTGGGGC
CGTATTGATG CTATGCAAGA CGAAGAAGGT AACTTTTGGC TATTAGAGAT TAATACCGTA
CCTGGTATGA CCAGTCACAG CTTAGTACCT ATGGCAGCTA AAGCACGTGG GATGAATTTT
GAACAGCTAT GTTGGCATAT CTTAGCCCAG ACGCTGTAA
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| Protein sequence | MPMTMTQSAT NPTATPVSAN KASANAATTQ DPSIFGKVAV VFGGNSNERA VSLDSGNAVL
QALQSQGIDA THFDPKDQDV TELKNYDRVF NVLHGRGGED GQLQGLLDWL GLPQTGSGVL
ASAIGMDKVR TKQLWHGCGL STAPFAVLGA DTDWQQIVNT LGLPLIVKPV HEGSSIGMSK
VNTLDELPKA YEVAAGCGDV VMAEKWITGR EFTIVIIDDE AYPVIRLQPA DISNFYDYEA
KYNRNDTQYH IPCGLSAEEE AHLQALSLAA FKAVDAKGWG RIDAMQDEEG NFWLLEINTV
PGMTSHSLVP MAAKARGMNF EQLCWHILAQ TL
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