Gene PsycPRwf_0490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0490 
SymbolfadE 
ID5206246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp583024 
End bp585873 
Gene Length2850 bp 
Protein Length949 aa 
Translation table11 
GC content48% 
IMG OID640598705 
Productacyl-CoA dehydrogenase 
Protein accessionYP_001279395 
Protein GI148652302 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCTT TAACTTTAGT TGGCTTTTTT ATACTCGCCA TCTTATTGCA GCTGTTCGCT 
CTACTGCTGG TATTTTTGTA TGGGCTAAGC CGCACTGTTG GTGCCATTTT TCTTATTGTC
ATTGCCGTGG TCAGTGCCTT TATCGCACCG TGGTCACTGT TATTGGGCGT GCCAATGATT
ATCGGTAGCC TGTTGGTTCT TATCGCACCA CTGCGTCAGG CAGTGATTAG TAAGCCGGCT
TATAAGATGC TGGCCGGCGC CATGCCTAGT ATGAGCGACA CCGAACGTGA GGCATTAGAT
GCAGGTACCA GCTGGTGGGA AAAAGAGCTG TTTATGGGTG CGCCGGACTG GAATAAGTTT
GCCAATTACC AGTACCCAAC GTTATCTGAA AAAGAACAAT CTTTTATTGA TAATGAAGTA
GAAATACTGT GTAGCATGTT AGATGAATGG CAAATTCATC ATCATGATAA GGACCTATCA
CCTCAAGCAT GGCAGTATAT TAAAGACAAT GGGTTTTTGG GGTTAATTAT CCCTGAAAGT
TATGGCGGGC GTGAGTTTAC CCCTTATGCT CAAAGCCGTA TTATGAGTAA GATCGCCTCA
CGCAGCTTAA CGGCTGCCGT TACGTGTATG GTGCCAAACT CATTGGGCCC AGGCGAGCTG
TTGATGCACT ACGGTACTGA GGCGCAAAAG CAGCGCTGGC TACCAGGTCT GGCTAAAGGT
ACTGAAATCC CTTGTTTTGG TCTGACCGGT CCTGAAGCTG GCTCAGATGC AGGTGCCATT
CCTGATACCG GCGTAGTGTG CTACGGCATG TATGAAGGCC GTGAAGTGCT GGGCCTTAAC
ATGAACTTCT CTAAGCGCTG GATTACCTTA GCCCCTGTGG CTACCGTAGT GGGTCTGGCC
TTTAAACTGC ATGATCCAGA TGGCTTATTG GGTGATAAAA ACAAAACTGA TTACGGCATT
ACGTGCGCCT TAATACCCGC CAATTATGAA GGTGTTCATA CCGGCGAGCG TCATAACCCA
GGCTCACCAT TTATGAATGG TACTGTGGTC GGTAAAGATG TCTTTATTCC GCTAGACTTC
ATTATTGGGG GAATAGAAAA TGCGGGTAGA GGCTGGCGTA TGCTGATGGA ATGTCTGGCT
GTGGGCCGCG GTATCTCGTT GCCTGCCCTA TCGACTTCAG CCGGCGAGAT GAGCTATTTG
ACGGTTGGTG CCTTTGCCAA AGTTCGTGAG CAATTCAAAA TATCTGTGGG TAAATTTGAG
GGCGTACAAG ATGCCAGCAG TAACATCGCC AGCAATACCT ACATGCTAGA GTCATTCCGT
CACTTGGTCA CCTGTGGCCT CAATGAAGGC GGCACGCCCT CAGTCATGAC TGCGATGGCC
AAATACTATG CTACTGAGAC CATGCGCAAA ATAGTCAATG ATGGTATGGA CATTGTTGGT
GGACGTGCTA TTCAGCTTGG CCCCCGTAAC TTCTTAGCAC TACCATATCA GGCCATACCG
GTTTCTATCA CTGTCGAGGG TGCCAATATA TTGACCCGTT CATTGATGAT CTTCGGGCAA
GGGGCCATGC GCTGCCATCC TTACTTATTT GAAGAGCTAC AACTGCTACA AAGTGAAGAC
AAACGCTCAG CACAGCATAA ATTTGATGAC ATGTTCTTCA AACATTTAGG CTATACCTTT
AACCGAGGTG CCCGCTCATT TGTGGCCGGT TATTTTGGCG GTAGCAGCAA AGCACCGAAA
TTCGCTGACA GCTTTAGCCG TCCTTATTAC AAAAAAATTA ACCGTTTAAG TGCCAACTTT
GCGCTGACTG CTGATATGGC ATTGGGACTT TTGGCTGGTG ACTTAAAACG CAAAGAGATG
CTGTCTGGCC GCTTAGCAGA CATTCATGCC CATCTGTTTA TTATGACGGC CATTTTACGT
TATTACGCCC AAGGCACTCA GTCAAAAGCA GAACAATTGC ACGCCCGCTT GGCACTAGAC
AATGCGTTAT ATACCATTCA AGAAGCCTTC TTTGAATTAT ATGCCAACTT CCCAAATCGT
ATGGCAGCCG GCTTGGTTAA ATTTGTCTGC TTCCCAGGCG GCGCTTTTGC CAGTAAGCCA
AGTGATGCGC TCAAACGTGA GGTGGGCGAG CTGATGATGT TAGATGGCGA GCAAAACCCT
TTCCGCGAGC AATTAAAAAG CTTGGTGTAT TACACCACAG ATCCGGACAA CAATACCGGC
CGTATCGAAA ACGCATTCCA GATGCTACGC CACATAGAGC CATTATGGCA CAGCTTTAAA
AAAGCGGAGA ACAAAGGCGA ATTTGCCGGT TTGACCTTTG AAGATCATGT GTTGACTGCC
TTAAAAGATG GGGTTATCAC CGAGCATGAG TCTGAACAGC TGATTGAGTA TAACGCTGTG
CGCTTTGATG CCCTGCTTAC AGACGTCTTT GATGAGCACT TAAATCATGC CTTACCCCGC
TACAATCCGC ATACCTTAGA AAATGCGGCG CAGAATTTAA CGCCTTATGT GCTTGAAGCC
ATTGAAAACC CTGCACAAGC TGCCTCAGAG CAGTCAGATT ATATAGAGGA CAGTGGCGAT
CAAAATAGCG CGCATGGCTA TCAGCAAGAT GGAGAGGTTA AGCCAGTCTC TGAACAAACG
CAGTTAGAGG AGCAGGTGGA TCAAGCCGAC TTTAATGAAG CCGACTTTAA TGAAGCAAAT
GATCCTCGCC TGCGTGATGC TGAATTGACA TTAGAGCAGC GCATGGCCAA AAACCATGCT
CGTCATCAAG CCAGCCTAGA GCAGGCCAAT AAGCAGACAG AGGGCGCTCA AAGCGATAGC
TCAGACAATC CGCATCGCCC CAATAAGTAG
 
Protein sequence
MTPLTLVGFF ILAILLQLFA LLLVFLYGLS RTVGAIFLIV IAVVSAFIAP WSLLLGVPMI 
IGSLLVLIAP LRQAVISKPA YKMLAGAMPS MSDTEREALD AGTSWWEKEL FMGAPDWNKF
ANYQYPTLSE KEQSFIDNEV EILCSMLDEW QIHHHDKDLS PQAWQYIKDN GFLGLIIPES
YGGREFTPYA QSRIMSKIAS RSLTAAVTCM VPNSLGPGEL LMHYGTEAQK QRWLPGLAKG
TEIPCFGLTG PEAGSDAGAI PDTGVVCYGM YEGREVLGLN MNFSKRWITL APVATVVGLA
FKLHDPDGLL GDKNKTDYGI TCALIPANYE GVHTGERHNP GSPFMNGTVV GKDVFIPLDF
IIGGIENAGR GWRMLMECLA VGRGISLPAL STSAGEMSYL TVGAFAKVRE QFKISVGKFE
GVQDASSNIA SNTYMLESFR HLVTCGLNEG GTPSVMTAMA KYYATETMRK IVNDGMDIVG
GRAIQLGPRN FLALPYQAIP VSITVEGANI LTRSLMIFGQ GAMRCHPYLF EELQLLQSED
KRSAQHKFDD MFFKHLGYTF NRGARSFVAG YFGGSSKAPK FADSFSRPYY KKINRLSANF
ALTADMALGL LAGDLKRKEM LSGRLADIHA HLFIMTAILR YYAQGTQSKA EQLHARLALD
NALYTIQEAF FELYANFPNR MAAGLVKFVC FPGGAFASKP SDALKREVGE LMMLDGEQNP
FREQLKSLVY YTTDPDNNTG RIENAFQMLR HIEPLWHSFK KAENKGEFAG LTFEDHVLTA
LKDGVITEHE SEQLIEYNAV RFDALLTDVF DEHLNHALPR YNPHTLENAA QNLTPYVLEA
IENPAQAASE QSDYIEDSGD QNSAHGYQQD GEVKPVSEQT QLEEQVDQAD FNEADFNEAN
DPRLRDAELT LEQRMAKNHA RHQASLEQAN KQTEGAQSDS SDNPHRPNK