Gene PsycPRwf_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0454 
Symbol 
ID5206101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp538809 
End bp539456 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content44% 
IMG OID640598669 
Producthypothetical protein 
Protein accessionYP_001279359 
Protein GI148652266 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.180134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.312368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA TCATTTTAAA AAAAGAGAGA AGTATGACAA AATACACCAA GGATACTAAA 
TCCACTAACT TAACGGATTT GAACGTGAGC AATAATACTG AAAAAAGTGC ACAGCAGTTA
CCTAATCACG TCAATTTAGA GAAGTGGGAA GATGCCGGCT ATGTTTGGTC CGGTAGCATT
ACCCCACGTC TGCTAAAGCG ATTGGTAGAT ATTGTCCCTG AAGACTATCA AGATAAGCCC
ATTGACTTAA GATGTGAGCT GAAAAAACAA GGTCAGCTAT TGACCTTAGA GATGCAGTTC
ACAGGTGATA TTTGGGTGAC GTGTCAGCGC TGTCTTAATC CACTGAACAT CGATGTCACT
CACGATGCGC AGCTGATACT ATTACAGCGT GAAGAGCAAG AAAGCTTGGT GGATGAGTCC
GATGATTATC TGCTGCTAGA GGAGCTGCTC GCCGATCAGC CTGAGAATAA AAAAGGCGAT
CGCCTGCTAC CACTAAAAAA ACTGGTCGAG GATGAGTTGC TGTTAGATGT CCCTTTATCT
GCCAAACATG ATGATTGTGA AATGGCAGTA GAGCAGGTCG GTGAAATTAT CGAAGAGGAG
GCAGAAAACC CGTTTGCCGC ACTCGAAGCA CTCAAAGGTA AGCTTTAA
 
Protein sequence
MSDIILKKER SMTKYTKDTK STNLTDLNVS NNTEKSAQQL PNHVNLEKWE DAGYVWSGSI 
TPRLLKRLVD IVPEDYQDKP IDLRCELKKQ GQLLTLEMQF TGDIWVTCQR CLNPLNIDVT
HDAQLILLQR EEQESLVDES DDYLLLEELL ADQPENKKGD RLLPLKKLVE DELLLDVPLS
AKHDDCEMAV EQVGEIIEEE AENPFAALEA LKGKL