| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0409 |
|---|
| Symbol | |
|---|
| ID | 5206470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 500692 |
|---|
| End bp | 501690 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640598623 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_001279314 |
|---|
| Protein GI | 148652221 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0408] Coproporphyrinogen III oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0203114 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTAA CCAACACCGG CATCAATAAT GCCGCCCCAA TTGTTGATAA TCCTGATAGC
CCCACTGCCA AGGACATTCA GCGTGTACGT GATTTTTTGA TTCAGTTACA AGCCAATATC
TGCCAAGCTC TAGAACAACA AGAAATCGAC GGCGGTGGTT CAGCGACTTT TGTGCCCGAT
GATTGGCAAC GTCCTGAGGG CGGCGGTGGT CGCTCTTGCG TTATGGCCGA TGGTGCGGTT
ATCGAAAAAG CGGGGGTTAT GTTTAGCCAC ATTCATATCA GCAACCTGCC TGCCACCGCC
ACTGCTCGCC ATCCTGACAT TGCTGGCCGT AAAGCTCAGG CCATGGGCGT GTCACTTGTG
GTGCATCCGC GCAACCCAAA TGTGCCTACC AGCCATGCTA ATGTGCGCTT GTTTGTCGCT
GAAAAAGAAG GCGAAGATCC GATTTGGTGG TTTGGTGGCG GCTTTGATTT AACCCCTTTT
TATCCTGTCC TAGAGGACTG TGTGCATTGG CATCACGTAT GCCATGAGCT GTGTGCGCCT
TTTGGTGAAG AGATTTATCC TGAATTTAAA AAATGGTGTG ACGATTATTT TTATCTGCGC
CACCGCAATG AGCAGCGCGG CGTGGGTGGT CTGTTCTATG ATGACGTCAA TACCCAAAGC
CGCGGCTGGG ACTTTGAGAC TTGCTTTAAA TTTATGCAAG CGGTCGGCCA AGGTTATCTA
GATGGCATAA TTCCTATTTT TGAAAAGCGC AAACAGTTGC CATACACCGA GCAGCAACGA
GAGTTTCAGC TGTATCGCCG TGGCCGCTAC GTAGAGTACA ACTTGGTTTA TGATCGGGGT
ACTTTATTCG GCTTGCAAAG TAATGGACGC ATTGAGTCAA TTTTGGTCAG CTTACCACCG
CTGACTGGCT GGCAGTATCG TTATGAGCCA GAGGCTGGCA CCCCTGAATA TGAGCTTACA
GATTTTTATC TAAAACCGCG TGATTGGCTG GCCCTATAG
|
|---|
| Protein sequence | MSLTNTGINN AAPIVDNPDS PTAKDIQRVR DFLIQLQANI CQALEQQEID GGGSATFVPD
DWQRPEGGGG RSCVMADGAV IEKAGVMFSH IHISNLPATA TARHPDIAGR KAQAMGVSLV
VHPRNPNVPT SHANVRLFVA EKEGEDPIWW FGGGFDLTPF YPVLEDCVHW HHVCHELCAP
FGEEIYPEFK KWCDDYFYLR HRNEQRGVGG LFYDDVNTQS RGWDFETCFK FMQAVGQGYL
DGIIPIFEKR KQLPYTEQQR EFQLYRRGRY VEYNLVYDRG TLFGLQSNGR IESILVSLPP
LTGWQYRYEP EAGTPEYELT DFYLKPRDWL AL
|
|---|
| |