| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0407 |
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| Symbol | |
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| ID | 5206468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 498975 |
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| End bp | 499922 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640598621 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001279312 |
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| Protein GI | 148652219 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.323817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0164618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACAGC TTGATAGTGT CAGCGATAAG ATTAACGAAT ACCAGACCAT AGCATCTGCT
GCCAATCAAA TGGTGAATGA CTTTATCGTA CGGCTGCCTT ATTTTATTGT GGCCTTATCG
GTGCTGCTGC TGTTTTGGCT GCTGTCGATA CTGTTCAAAA AGCTTGTCAC TAAGCTATTA
TTAAAGACGC ACACCCACCG TAACTTGATC AGGGTTTTTC AGCGTATTGG TGGCGCACTC
ATTATCTTCG TGGGAGTGAT GGTGGCCATG GTCATTGCCA TCCCTGGGTT CACGCCTGCC
AAATTGGTCG GTGCGCTGGG CATTGGTTCG GTGGCCATCG GTTTTGCCTT CAAGGACATC
TTCCAAAATC TGTTGTCCGG TATTTTATTG CTGCTGTCTG AGCCGTTTCG TATCGGAGAT
CAGATTGTCT CAGGAGACTA TGAAGGGACG GTTGAAGACA TTAAGGTACG TGCGACCACC
ATTCGCACCT ATGATGGGCG ACAAGTGGTC ATCCCCAATT CTCAGCTGTA TACCAGTGCA
TTAACAGTGA ATACGGCGTA TAAGCGTCGC CGGTTAGAGC TGACGGTCGG CATTAGTTAT
CAAGATGATA TTAATGAGGC GAAAGCTGCG ATACTAGAGG CATTAAAGCA GTCTGAGACC
GTCTCTAAGT TGGCTGAGCC TTCGGTGGTG GCGACTGAAT TTAGTGGCTC AAGCATTGAC
TTGAAGGTGC GCTGGTATAT CGATGATGGG ACACAGGCCA ATAAGGTGGC CTCTATTCAT
GAAGTGATTG TACAGACAAA ATCACATTTG GATGCGGCCG GGGTCAGTAT ACCTTTTCCG
ATTCGCACCT TGGATTTTAG TGATGCCTCA GCCCAAGCTT TAATAGACAA CATGGTAAGC
GCCCAGCAGG TGTCACAAAG CTGCGCTCAT AAAAGCAGCC GGAAGTGA
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| Protein sequence | MPQLDSVSDK INEYQTIASA ANQMVNDFIV RLPYFIVALS VLLLFWLLSI LFKKLVTKLL
LKTHTHRNLI RVFQRIGGAL IIFVGVMVAM VIAIPGFTPA KLVGALGIGS VAIGFAFKDI
FQNLLSGILL LLSEPFRIGD QIVSGDYEGT VEDIKVRATT IRTYDGRQVV IPNSQLYTSA
LTVNTAYKRR RLELTVGISY QDDINEAKAA ILEALKQSET VSKLAEPSVV ATEFSGSSID
LKVRWYIDDG TQANKVASIH EVIVQTKSHL DAAGVSIPFP IRTLDFSDAS AQALIDNMVS
AQQVSQSCAH KSSRK
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