Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0386 |
Symbol | cysM |
ID | 5204910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 464533 |
End bp | 465480 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640598600 |
Product | cysteine synthase B |
Protein accession | YP_001279291 |
Protein GI | 148652198 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | [TIGR01136] cysteine synthases [TIGR01138] cysteine synthase B |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00653923 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000049747 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTCAAATA CGTCGCAAAA TTCTGTGAAC TTTATCCAAC AAGTCACCAC TTTATCAGAC TGCTTAGGCA ACACGCCTTT AGTTGCACTA CAGCGTCTAC CCAAGCTTGA GGGGATAGAT ACTTCAGTAC AAGTTTTGGC CAAGCTTGAA GGCAACAACC CTGCCAGCTC AGTAAAAGAC CGCCCTGCCT TTAATATGAT TTTACAGGCC GAAAAACGTG GTGAAATTAA GCCAGGTGAT ACGTTAATTG AGGCCACCAG TGGCAATACT GGTATTGCTT TAGCGATGGT AGCTGCCATG CGTGGCTATA AAATGATTTT GTTGATGCCC ACCAACTCCA CCCAAGAGCG CAAAGATGCC ATGGCCGCTT ATGGCGCCAC TTTAATTGAA GTGGACGAAG GTATTGAAGC CGCTCGTGAC CAAGCTTTGC AGCTACAGGC TGAGGGCAAA GGCATCGTCT TAAACCAATT CGCCAACCCA GATAACAGCG CTGCTCACTA CCAAACCACA GGACCTGAGC TGTGGCGTCA AACTGGCGGA CGTATCACCC ACTTTATCAG CTCAATGGGT ACCACAGGAA CCATATCAGG CACCGGTAAA TATCTCAAAG AGCAAAACCC AGATATCCAA GTTATTGGTT TACAGCCCGA TGCAGACTCT GCCATTGCCG GTATTCGCCG CTGGCCTGAG GAATACAGAC CAGCCATCTA TGACCCCACA GTGATTGATC GCACCATAGA CATCAGCCAA CATACTGCAG AAGAGTACAT GCGCAAATTA GCACACACCG AAGGCATTCT AGCTGGGGTT TCTTCAGGTG CAGCCGCTTG GGCAGCGCTA CAAGTGGCCA AAGAGATTAA AGACACTCAG CCAGACGCTG TGATTGCCTT CATCGTCTGT GATCGTGGTG ATCGATACTT ATCTACTGGG TTATTTACCG CCCAATAG
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Protein sequence | MSNTSQNSVN FIQQVTTLSD CLGNTPLVAL QRLPKLEGID TSVQVLAKLE GNNPASSVKD RPAFNMILQA EKRGEIKPGD TLIEATSGNT GIALAMVAAM RGYKMILLMP TNSTQERKDA MAAYGATLIE VDEGIEAARD QALQLQAEGK GIVLNQFANP DNSAAHYQTT GPELWRQTGG RITHFISSMG TTGTISGTGK YLKEQNPDIQ VIGLQPDADS AIAGIRRWPE EYRPAIYDPT VIDRTIDISQ HTAEEYMRKL AHTEGILAGV SSGAAAWAAL QVAKEIKDTQ PDAVIAFIVC DRGDRYLSTG LFTAQ
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