| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0374 |
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| Symbol | rnc |
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| ID | 5205359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 449067 |
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| End bp | 449846 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640598588 |
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| Product | ribonuclease III |
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| Protein accession | YP_001279279 |
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| Protein GI | 148652186 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.7646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000724257 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAGAAA CGGCTGAGAT AGCCCATACG AGCAAGCAGT CGCCCAAACA GCGCTATACC
AGCTTTGAGC TGGGACTGCT AAGCTTACAA AAACAGCTCG GTTATAGCTT TAACGACACC
AGTTTGGCTA AGCTTGCACT GACGCACCGC TCTTTTGATG GCAAAATAAA CTACGAGCGT
TTGGAGTTTT TAGGCGATGC CCTGTTAGGG ATGATTATCG GTGAAGCTTT GTACTATCAG
TACCCCAAAC AAGATGAAGG CCGTTTGACT CGCATGCGTG CCACTTTGGT GCGCCAAGAA
TCCTTGGTAG TCGTGGCACA AAAGCTTAAC TTATCGTCGT ATTTGATATT GGGTGTGGGT
GAGCGAAAAG GCGGTGGCCG AGAGCGTGCC TCAATTTTGG CAGATACGGT GGAGTCTTTA
ATTGGCGCCA TTTATTTAGA CAGTCAAAGC GTGGATACGG TCAAAGCCTG TGTGCTAGAT
TGGTTTGCGG AGCTGATAGA CAACGTCAAT GATCAACGCG TGCTAAAAGA TGCCAAAAGC
CGGCTACAAG AATGGTTACA AGGCTATAAG TTTGAGCTGC CCAATTATGA CTTGCTCGAG
ACGCAAGGCA ATGCGCCCAA CCAAGTATTT ATTGTGCGCT GTGAGGTAGA TGTACCGCAC
ACTACGCCCA TTGTAGAGTC TGGTGAAAGC CGCCGAATTG CGGAACAAAA GACGGCTGAA
AAAATGATTA ATCAGCTCAA TAAATTGGTT AACGACCGCA TTATTAAAGT CAAAGCTTAG
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| Protein sequence | MTETAEIAHT SKQSPKQRYT SFELGLLSLQ KQLGYSFNDT SLAKLALTHR SFDGKINYER
LEFLGDALLG MIIGEALYYQ YPKQDEGRLT RMRATLVRQE SLVVVAQKLN LSSYLILGVG
ERKGGGRERA SILADTVESL IGAIYLDSQS VDTVKACVLD WFAELIDNVN DQRVLKDAKS
RLQEWLQGYK FELPNYDLLE TQGNAPNQVF IVRCEVDVPH TTPIVESGES RRIAEQKTAE
KMINQLNKLV NDRIIKVKA
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