| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0369 |
|---|
| Symbol | nhaA |
|---|
| ID | 5205354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 442104 |
|---|
| End bp | 443303 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640598581 |
|---|
| Product | pH-dependent sodium/proton antiporter |
|---|
| Protein accession | YP_001279274 |
|---|
| Protein GI | 148652181 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3004] Na+/H+ antiporter |
|---|
| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0301682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000785162 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGTACCAGA AACTAAAAAA ATTCTTTGAG TATGAGGCGG CAGGAGGCAT TGTGCTGGCA
CTGGCAGCCA TCGCAGCCAT GATCGTTGCC AACTCTCCCT TACATGATTG GTATGAGTCT
TTTATTCACG CCCCTGTGGT GGTTCAGGTG GGCGAGCTAA TTATCAGCAA AGATGCGCAT
CATTGGATTA ATGATGGTTT GATGGCGGTG TTCTTCTTCT TAGTCGGCTT AGAGCTTAAG
CGCGAGGTAT TGATTGGTGA ATTATCTAAT ATCAATCAAA TTGTCCTGCC GGCGGCGGCG
GCCGTCGGGG GCATGATAGC GCCAGCTTTG GTCTACGTCG CTTTTAATGC CAGCCACCCC
GAGTACTTGG CAGGCTGGGC AATTCCTGCT GCCACAGACA TCGCTTTTGC CATTGGTATC
TTAAGTTTGC TTGGTAGCCG TGTACCGAAC TCGTTAAAGA TATTTTTAGT GTCAATTGCC
ATCTTTGATG ACATTGGCGC CATTTTAATT ATCGCTTTGT TTTATACCAG TGACTTGTCG
TTGTTATCTT TATTGATAGC AGGATTGTGC TTGCCGTTTT TATACCTGCT CAATCGCCGT
AATGTCACGG CAATTACCCC CTATTTATTT TTTGGGATTA TCATGTGGAT TGCGGTATTA
AAATCCGGTA TTCATGCCAC TTTGGCGGGG GTTATCCTAG CACTATTTAT CCCTATGGTG
AATACAGATG ACCCTGAGCA CTCGCCCCTT GAAGACTTAG AGCACGACCT ACATGGCACG
GTAGCCTTTG CGATTTTACC GCTATTTGCC TTTGCAAACG CTGGTATCTC ATTGCAAGGT
GCTGGATTTG GTCAGCTGTT ACACTCAGTG CCCTTTGGTA TTGCGGCCGG TTTATTTATC
GGTAAACAGG TGGGTATTAT GCTGATGACT TGGAGCATTA TTAAAGCAGG CCTAGCCTCA
TTGCCTAATG GCACCAACTT TAAGCAAATC TATGGTGTTT CTTTGCTGTG CGGTGTGGGC
TTTACCATGA GCTTGTTTAT CAGTGGCCTA GCCTTTGGCG GCGTTACCGA AGGTTTCGAT
CCGCGCTTGG GTATTATCCT AGGCTCTATC ATCTCAGGCA TTGCCGGCTA CATGCTGCTA
AAGCGTACTT TAAAAGAAGA CACTGCCACT GGCATCACTG CACTGGATTT AACTCGATAG
|
|---|
| Protein sequence | MYQKLKKFFE YEAAGGIVLA LAAIAAMIVA NSPLHDWYES FIHAPVVVQV GELIISKDAH
HWINDGLMAV FFFLVGLELK REVLIGELSN INQIVLPAAA AVGGMIAPAL VYVAFNASHP
EYLAGWAIPA ATDIAFAIGI LSLLGSRVPN SLKIFLVSIA IFDDIGAILI IALFYTSDLS
LLSLLIAGLC LPFLYLLNRR NVTAITPYLF FGIIMWIAVL KSGIHATLAG VILALFIPMV
NTDDPEHSPL EDLEHDLHGT VAFAILPLFA FANAGISLQG AGFGQLLHSV PFGIAAGLFI
GKQVGIMLMT WSIIKAGLAS LPNGTNFKQI YGVSLLCGVG FTMSLFISGL AFGGVTEGFD
PRLGIILGSI ISGIAGYMLL KRTLKEDTAT GITALDLTR
|
|---|
| |