| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0326 |
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| Symbol | |
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| ID | 5206818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 391637 |
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| End bp | 393475 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640598536 |
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| Product | cysteine ABC transporter permease/ATP-binding protein |
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| Protein accession | YP_001279231 |
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| Protein GI | 148652138 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000212628 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAACAC TTTCTACTGC CGAAAAAGAC TTTTTAAAAA AGCTGGTAAA TACAGTGCGT
CGCCCGTTAA CGATGGCGTG GCTGCTGACG GTTATCAGCA GCTTATTATT TGTGTGGCAA
GCGTGGTTAT TGGCCAGTTT ATTTAGCCAT TGGTTGAGCA ACTATTTTAA TCAAGTGCCG
TTATCAAGCG GGGTGTCGGG CAGCTGGTTT GTGGGGCTGA TCATCTGCTT TGCCCTGCGC
CCACTGCTCA ATACTGGCCG TGAGCTGCTC AGCACTCAAG CAAGCTTACA AGTGCGCAGT
GATTTACGCA GCTCGCTACT TATCACTATG GCCAAGCTTG GACCCAATCT GCGCCACTTC
GGCAGTGATG GCAGCCTCTC TAGCCAAATC ATTGATCAGA CCGATGCCTT AGATGGATTT
ATCAGCCGCT TTAGTGTTCA AAAACAAGTC ACGCTCAGCA CCCCACTTAT CTTGCTTGTC
GCTGTGGCTT GGCAAAGCAA ATTTGCCGCA GCCTTATTAT TGATGACCGC GCCTTTGGTG
CCTATATTTA TGATTTTAAT TGGCCATTTA ACTGCCCGCA AAAGCGCCGC TCAGTTTGGC
GCCCTGTCGC AATTAAGCGG CCGGTTTTTG GACTGGATCC GCGGTATGCC CACCCTTAAG
CGGCTACAAG CGACACCTAT TGCTGAGCAT GATTTGGCTG TAAGCAGCGA AGACTATCGC
CGCCGCACCA TGGATGTGTT AAAGATTGCC TTTTTAAATG GGGCGGTGCT TGAGCTTTTG
GCAGCGCTCA GCATTGCCTT GGTCGCGGTC TATTTAGGCT TTGGGCTAAT GGGCATTTTG
CCGTGGGATA AAGGTGATGT GCCAGTACCT TACTTCGGTG CCTTATTCAT CTTGCTGCTG
GCACCTGAGT TTTATGTACC GCTGCGTCAA TTGGGCGCAG ACTATCACGC CAAAGCTGAA
GCAGAAGGCG CTGTCCAAAG CTTGCTGCCT ATTATTAACG CGGCCGAATC TGCCAATGCT
GTCGTTATCC CTCAACAGCC AGACACACCC CCTACTTCTA CCACGACATT ACCACAAAGC
TTTGGCCTAC AGTTAAGTAA GGTTAGTATT CAGACAGCGG TGGTGGATAT CCAAGCGCCA
CAGGAAGATT CAGCGCCCTT AGCTGATAAT GACTGTACGG CTGCTGTATA TCGCAGCCGT
CTGGCGCCGT TAACGGTAGA TATAGAGCCG GGAGCGCGCG TGGCCTTAGT GGGTGAAAGC
GGCAGCGGTA AGTCAAGCCT GTTACAGGCT TTGATGGGCT TTGTCAGCTA CCAAGGTGAT
ATCACCCTTT ATAATGCTGC TGAGAATTTT AGTCAAAACT TACAGCACAT CGCGCCGGAG
CAGTTACGCC AGAAGCTTGG ATATTTGGCT CAGCAAGTGG CGCTGATGCC GCTAAGCATT
GCTCAGAACC TACGTCTTGC CAATCCTGAT GCCAGCGATG CTCAGTTAAT TGAAGTACTC
AAACAAGTTG AGCTGTGGTC ATTAATTGAA CGACTACCAC AAGGCATGGA CACCTTGTTA
GGCGAGCGAG GACAGGGATT ATCTGGGGGA CAACAGCAGC GGCTGGGCAT CGCTCAGTTG
TTATTAAGAA ACGACAGCTT GTGGCTGCTT GATGAGCCTA CCGAACATCT AGATCCTGAT
ACGGCGCAGC GCATTCATCA GCTTTTGCAG CACGTGAGCC TCGGTAAAAC GGTGATTTGG
GTCACCCACG CCAAAGAGCA GCTGCCTTGG CTGGATAAGG TGATTGCCAT CAGCGCTCCG
GTTACAGCAA GTGTGGCACA AGGAGCAGAC TATGAGTAA
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| Protein sequence | MATLSTAEKD FLKKLVNTVR RPLTMAWLLT VISSLLFVWQ AWLLASLFSH WLSNYFNQVP
LSSGVSGSWF VGLIICFALR PLLNTGRELL STQASLQVRS DLRSSLLITM AKLGPNLRHF
GSDGSLSSQI IDQTDALDGF ISRFSVQKQV TLSTPLILLV AVAWQSKFAA ALLLMTAPLV
PIFMILIGHL TARKSAAQFG ALSQLSGRFL DWIRGMPTLK RLQATPIAEH DLAVSSEDYR
RRTMDVLKIA FLNGAVLELL AALSIALVAV YLGFGLMGIL PWDKGDVPVP YFGALFILLL
APEFYVPLRQ LGADYHAKAE AEGAVQSLLP IINAAESANA VVIPQQPDTP PTSTTTLPQS
FGLQLSKVSI QTAVVDIQAP QEDSAPLADN DCTAAVYRSR LAPLTVDIEP GARVALVGES
GSGKSSLLQA LMGFVSYQGD ITLYNAAENF SQNLQHIAPE QLRQKLGYLA QQVALMPLSI
AQNLRLANPD ASDAQLIEVL KQVELWSLIE RLPQGMDTLL GERGQGLSGG QQQRLGIAQL
LLRNDSLWLL DEPTEHLDPD TAQRIHQLLQ HVSLGKTVIW VTHAKEQLPW LDKVIAISAP
VTASVAQGAD YE
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