Gene PsycPRwf_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0324 
Symbol 
ID5206816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp388609 
End bp389718 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content44% 
IMG OID640598534 
Producthypothetical protein 
Protein accessionYP_001279229 
Protein GI148652136 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000113156 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAAAAA AAAGTAATAA GTCTGAGAAA ATTAGCGACG CTTATGTGAC CAATCCCAAA 
AAGATTGAAA AGTATGAAAC CCAAAAGAAA AAAGACAGCT CACGTATAAA GACCAAAGAA
GTTATTGATC AGGTACTGCT AAAACAACTA GCAGAGGGCA ATATCGAGGC GATATCAGAT
CGTATTCAAT CGCTCATTCA TGATGCTTCT CCAGATGACC TAGAAAAGCT AAAAAATCTA
TTTGCCAATC ATGCGTTGGC CAATGCTGTC AAAACAGGCA CCAAAAGAGA CGATGAGTTA
TCGGATAACT GGCGTGAAGG CGGCTATCCT TATAAAAACC GCTTATCGCG TAAAAACTAT
GAAAAACAAA AGTATCACCT GCAAGTTGAG CTCTTAAAGC TACAAAAATG GGTGCGTGAA
AATGACAAAA AAGTGGTCAT TATCTTCGAG GGGCGTGATG CGGCCGGTAA AGGCGGCTCT
ATCAAGCGCT TTATGGAGCA TTTAAACCCT CGTAGCTCAC GAGTTGTGGC ACTAGAAAAA
CCCACCGAGC GTGAGATGGG GCAGTGGTAC TTCCAGCGCT ATGTGCAGCA TTTGCCCTCA
GCTGGAGAGA TGGTGTTCTT CGACCGCTCA TGGTACAACC GCGCTGGCGT TGAGCGGGTA
ATGGGCTTTT GTACGGAAGA AGAGTACGCT ACTTTTATGC GCCAAACTCC TGAGTTTGAG
AAACACTTAA TTGACTCGGG CATTCATTTA ATCAAGTTTT GGTTCTCAGT GAGCCGTGAT
GAGCAGCGTC GCCGATTTGC TCAGCGTGAA GCGCATCCCT TAAAGCAGTG GAAGTTATCT
CCCATTGATT TGGCTTCACT GGATAAATGG GATGAATACA CTTTGGCTAA AGAAGCCATG
TTCTATAATA CTGACACCGC AGAATCCCCT TGGATTGTCA TCAAGTCAGA TTGTAAAAAA
CGTGCCCGTC TTAATGCCAT GCGCTATGTG TTAAATAGAC TTCCCTACGA TGGCAGAGAC
AAGAGTCAGG TGGGGAATGT TGATCCGCTT ATTGTCGGTC GTGCAGGTGC ATTATATGAA
TTGGGAGAAA AATCGGACCT AGAGATTTAA
 
Protein sequence
MSKKSNKSEK ISDAYVTNPK KIEKYETQKK KDSSRIKTKE VIDQVLLKQL AEGNIEAISD 
RIQSLIHDAS PDDLEKLKNL FANHALANAV KTGTKRDDEL SDNWREGGYP YKNRLSRKNY
EKQKYHLQVE LLKLQKWVRE NDKKVVIIFE GRDAAGKGGS IKRFMEHLNP RSSRVVALEK
PTEREMGQWY FQRYVQHLPS AGEMVFFDRS WYNRAGVERV MGFCTEEEYA TFMRQTPEFE
KHLIDSGIHL IKFWFSVSRD EQRRRFAQRE AHPLKQWKLS PIDLASLDKW DEYTLAKEAM
FYNTDTAESP WIVIKSDCKK RARLNAMRYV LNRLPYDGRD KSQVGNVDPL IVGRAGALYE
LGEKSDLEI