Gene PsycPRwf_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0315 
Symbol 
ID5204889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp376938 
End bp379145 
Gene Length2208 bp 
Protein Length735 aa 
Translation table11 
GC content47% 
IMG OID640598525 
Productcarboxyl-terminal protease 
Protein accessionYP_001279220 
Protein GI148652127 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0793] Periplasmic protease 
TIGRFAM ID[TIGR00225] C-terminal peptidase (prc) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.44056e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.88236e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGATTTC AACCAACCCA GCTGGTGTTA AGTGCCGCCG CCATTGGTAT GGCCGGTGTG 
GTGTTATCAC ACAGCTATAG CTCTGCTGTG GCTGCGGATA AAAGCGCCTT TGTTGCCACA
CCCGAGCAAA AGCTTACCAC ACGCCAAGTA GCCGCTTTAT TAGACAGAGC GCATTATTCC
AATAAGCGCT TTGATGAGGC GATGGGCCGT AAAGTGTTGG ATATGTATTT TGACCGTTTG
GACCCCAATC ATACTCTATT TTTGCAATCA GATATTAATG AATTAACCAC CAAATACGGT
GCAACTTTTG CCGATAGATT AAAGCAGGGC GATCTCAGCG CAGTACAGGC AATTTTTAAT
CGTTATACCC AGCGATCAAA TGAGTACTAT AACTTCGCCG ATAAGTTCTT AAGTAAGCCT
GTCAATCTTA ATCGCAATGA TTCTGTGGTG CTTGACCGTG AAAAAGAACC CCGCTTTAAG
AGTGCTTCAG AGCAACAAGG CTATTGGGGC CGTCAATTAA CTTTGCAGAT TATCAATCTA
ACTTTAGGTC AAGAAGAAGA CAAGGCTCGT GATGAGCTGT ATACCAAAAA CCCTGAGCTG
ACCAAAGGTA ACGACTTAAT CTTAGGAGAG GACAGAAGCC CGCAAGAGAT TTTGTTAAAT
CGTTTGCATC GTCAGCAAGA GCAGCTACAG CGCATTAAGA GCGATGAGAT CATGGAGTCG
GTGCTAAATA CAGCCACCTT AACTTATGAT CCGCACAGCA ACTATTATGC CCCTGTGCAA
TCGGTCGAGA TGCAAGTGCA GTCCAACTTG CAATTAGAAG GTATTGGCGT GTCTATTCGC
CCTTATCGTA AAAACCCAGA TTATACCCAG ATTGTGACCT TGGTTGATGG TGGACCCGCT
GCCAAATCAG GCAAAGTGCA GCCCAATGAT TTGATCATGG CTGTGGCCAA AGATGGCGAG
AATATGCAAG ATGTGGTGGG CTGGTCAACT CGTGAAGTGG TGGCCTTAAT CCGCGGCAAA
CGTGGCACAG ATGTGACCAT CAAAGTTAAG CAGCCCAATA GTCCTGATGC CTCAGCACGT
ACCATTGTCA TCACCCGTGA TGTGATTGAG CAAGAAGATG CGGGCGTGAC TCATCGGGTG
ATTACGGTAA AACCTGAAGG CAGCACGGAA GAAAAACGCA TCGGTGTGCT TGAAATACCA
AGCTTCTATC TAAACTATCA AGCCCGCCGC AGTGGTCAAA ACTACCGCAG CGTGAGTATC
GACACTCAAA AAGAGCTTGA GAAGCTTGAT AAAGAAAACA TTGACGGCCT GGTGGTCGAT
CTACGCAATA ACCCTGGCGG CTCCTTAGAT GAAGTGGCTA AAATGCTGGG ATTATTTATT
AAAGAAGGGC CGCTGGTTCA GATTCGTGAC AACCAGGGTA ACGTGCAAGT CTATCAAGAC
GAAGATGGTG GTAAGCAGCT GTATTCAGGC GATATGGTGG TCATTACCAA TATGGCATCA
GCCTCTGCCT CTGAGATTTT CGCCGCTGCC ATTCAAGACT ATGGCCGCGG CTTAGTAGTG
GGTAGTACCA CCACCGGTAA GGGCTCAGCT CAGATTCAGT TAGATAGTCT GGCCTTAGGC
TCAGCCACGT TGACTCAGCG TAAGTTTTAT CGCATTACAG GCGGCAGTAC CCAGAATAAA
GGGGTAGTGC CTGATGTGTC TTTAGTCAAT ATCTATGAAG GTGCTGAATT TAGTGAGCGC
GACCAAAAAA ATGCCATGGC TTGGGATACC ATCAAGACCT CGCCTTATAA GCCTGAAGGC
AAATTTAGCA GTAAGACGTT AGCGACCTTA AATCAGCAGT CCAAGATTCG TCAAACCACC
AATCCGCAGT TTGTTTATCT AGATACGCTA AATAAATTAC GCAATATGGA AGATGACAAA
AATGCGGTTA AGCTAAATAT CACTGAGCGC CGCGCACATC AAAAACAGAT TGAGCAAAAA
ACTTTAGATG CAGAAAATGC ACGTCGTAAG GCCACCGGTC AAAAGCCTTA TGCCAGCTGG
ACTGAGTATC AAGCTGCTGT CGAAGCCATG TTCGAAGAGC GCAGTCGTCT AAAAAATGAT
GAGCGTCCTA AGCTACCAGA AGAAGAGGCA TACGTGATTG AAGCGGCCAA GCTGATGCTT
GATGCCCGTA AGCTGCAAAA GTTCGATGAG CTACGCAGCG CCAAGTAG
 
Protein sequence
MRFQPTQLVL SAAAIGMAGV VLSHSYSSAV AADKSAFVAT PEQKLTTRQV AALLDRAHYS 
NKRFDEAMGR KVLDMYFDRL DPNHTLFLQS DINELTTKYG ATFADRLKQG DLSAVQAIFN
RYTQRSNEYY NFADKFLSKP VNLNRNDSVV LDREKEPRFK SASEQQGYWG RQLTLQIINL
TLGQEEDKAR DELYTKNPEL TKGNDLILGE DRSPQEILLN RLHRQQEQLQ RIKSDEIMES
VLNTATLTYD PHSNYYAPVQ SVEMQVQSNL QLEGIGVSIR PYRKNPDYTQ IVTLVDGGPA
AKSGKVQPND LIMAVAKDGE NMQDVVGWST REVVALIRGK RGTDVTIKVK QPNSPDASAR
TIVITRDVIE QEDAGVTHRV ITVKPEGSTE EKRIGVLEIP SFYLNYQARR SGQNYRSVSI
DTQKELEKLD KENIDGLVVD LRNNPGGSLD EVAKMLGLFI KEGPLVQIRD NQGNVQVYQD
EDGGKQLYSG DMVVITNMAS ASASEIFAAA IQDYGRGLVV GSTTTGKGSA QIQLDSLALG
SATLTQRKFY RITGGSTQNK GVVPDVSLVN IYEGAEFSER DQKNAMAWDT IKTSPYKPEG
KFSSKTLATL NQQSKIRQTT NPQFVYLDTL NKLRNMEDDK NAVKLNITER RAHQKQIEQK
TLDAENARRK ATGQKPYASW TEYQAAVEAM FEERSRLKND ERPKLPEEEA YVIEAAKLML
DARKLQKFDE LRSAK