Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0307 |
Symbol | tig |
ID | 5204516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 366062 |
End bp | 367399 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640598517 |
Product | trigger factor |
Protein accession | YP_001279212 |
Protein GI | 148652119 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000121023 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.638239 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAG ATCTACAAGT AACGACCAGC AAGGTCAATG ACAACCAAAC ACAACTTACT GTAAAAGTGC CTGTTGAACA AATCCAAAAC AAAGTGGAAG GCCGTATCCG CAATGTGGCA AAAACTGCCA AAATTGATGG TTTCCGTAAA GGTAAAGTGC CTGTTTCACA CATCCGTGCC CAATATGGTG CTGGTATTCA GCAAGAAGTG ATCAACGATG TGATCCGTGA CACCGTATTT GAAGCTATTA AAGCTGAAGA CGTGCGCGCT GTTGGCATGC CAAACATTGA TGATGTAAAA CTAGAAGATG AATTCTTAGT GTATCAAGCC ACAGTTGAAA TCTTCCCAGA AATCAAAGTT GAAGGCATGA GCGACATCGA AGTTGAGCGT CACACAGCGA CCATCACTGA TGAAGACGTT GACACCATGA TTGAAAACCT TCGCAAACAG CGTCAAGAAT TCGCTGAAAA AGAAGGCGCT GCCGATGAAG GCGATCAAGT TACTTTTGAT TTCGAAGGTT CTATCGACGG CGAAAAATTT GAAGGCGGCT CAGCTGAAGA CTTCAAACTT GTGTTAGGTA GCGGCCAAAT GATTCCAGGC TTCGAAGACG GTATCAAAGG TCTTGCTGCT GGTGAAGAAA AAACCATCGA CGTGACCTTC CCAGAAGACT ACCAAGCTGA AAACTTAGCG GGTAAAGAAG CTCAGTTCAA AATCAACGTG AAAAAAGTTG AAGAAGCCAA ACTGCCAGAA ATCAACGATG AATTCTTAGA ATTATTCGGC GTAAAAGAAG GCGGCGTAGA ACAGCTTAAA ACTGATGTTC GCAAAAACAT GACGCGCGAA ATCAAAAACG CTGCCCGTAA CCAAGTCAAA CAAGCGGCCT TTGATGCGCT ACTTGAAAAG AACGAATTTG ACGTACCAAG CGCTATGGTT GACCAAGAAG TTGACCGTCA ACGTAACCTA ATGATGCAAC GCTTTGCTCA GCAGTTCGGC GGCAATGCTA ACAGCATCGA CAAAGACATG TTGCCACGTG AGCTATTTGA AGAGCAAGCC ATCCGTGCGG CCCGTCTTGG CGTTCTAGTA TCACGCGTTA TCGAAGAAAA CGATCTGAAA GTTGACCAAG AGCGTGTTGA GACTTTCATC AAAGAAACGG CTGAAAACTA CGAAGATCCT CAAGAGGTTA TCGAGTACTA CACCAATGAT GCACAGCAGC GCGCTAACAT CGAGTCTGTA GTATTAGAAG ACCAAGTGGT TGACTTCTTA CTTGAGCAAG GCAAAGTCAC TGACAAAGAA GTCGGTTACC AAGAGCTTCT AGCCTCTCAG CAACAAGGCA TGATGTAA
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Protein sequence | MAKDLQVTTS KVNDNQTQLT VKVPVEQIQN KVEGRIRNVA KTAKIDGFRK GKVPVSHIRA QYGAGIQQEV INDVIRDTVF EAIKAEDVRA VGMPNIDDVK LEDEFLVYQA TVEIFPEIKV EGMSDIEVER HTATITDEDV DTMIENLRKQ RQEFAEKEGA ADEGDQVTFD FEGSIDGEKF EGGSAEDFKL VLGSGQMIPG FEDGIKGLAA GEEKTIDVTF PEDYQAENLA GKEAQFKINV KKVEEAKLPE INDEFLELFG VKEGGVEQLK TDVRKNMTRE IKNAARNQVK QAAFDALLEK NEFDVPSAMV DQEVDRQRNL MMQRFAQQFG GNANSIDKDM LPRELFEEQA IRAARLGVLV SRVIEENDLK VDQERVETFI KETAENYEDP QEVIEYYTND AQQRANIESV VLEDQVVDFL LEQGKVTDKE VGYQELLASQ QQGMM
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