Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0286 |
Symbol | |
ID | 5206009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 340063 |
End bp | 341487 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640598496 |
Product | lytic murein transglycosylase |
Protein accession | YP_001279191 |
Protein GI | 148652098 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGTA CCCCTCTTGC TGCTACCTTG ACCACGGCCC TTGGCATTTC TTTGGCGGCC ACCTCAGCAC ACGCCGCCAA GCCACCGGCC CCTAACTTAT CAAATGCTGA ATTTCAACAG TGCTTAAGTG GCCTAAAAAA CTCAAGTACT TTTCGCGGCG TAAGCAGCTC AACTTTTGAA AACTATCGCC CCAGCGAGCC AGATCCAAGT GTGATTGCTT CGTTAAACTA TCAACCTGAG TTTCAAAAAG ATGTGTGGGA TTATCTGTCA TCACTGGTGG ATAAAGAGCG CGTTGAAGAT GGTATTCGTG CCAAGCATGA GATGGCAGAC ACCTTACGCC GCATTGAGGC GCGTTACGGG GTAACGCCTG AGCACGTGCT GGGCGTGTGG GGTGTCGAGT CAAACTTCGG TCAAACCTTA GGCAAAAAAG ATCTGTTCCA GTCATTGGCT ACTTTGTCTT GCTTTGACCG CCGTCAGTCT TATTTCCGCG GCGAATATGC CAATGCCCTA AAAATCGTAC AACAAGGCGA CATTCGCCCA CAAGATATGA CAGGCTCTTG GGCAGGCGCT TTTGGTCAGA CTCAGTTTAT GCCCGGTACT TTCCTTGATT TGGCGGTAGA CTTCGATGGT GATGGCCGCC GAGACTTGGT CAACAGTAAG GCTGATGCGC TGGCATCAAC TGCCAACTTC TTAGCCAAAC GTGGCTACCG CAGCGGAGAG CCATGGGGTT ATGAAGTAAA AATTCCACAA GGATTCTGGG GCAGCAATAG CCGCAAAGAC AAAAAATCTA TGAGCTACTG GCGTGACAAA GGCTTCACGT TAGCCGATGG TCGTCCTCTA CCTTATGACT TAAGCAGCGC AGGATTACTG TTACCTGCCG GCCTAAATGG CCCTGCCTTC TTAGTGGGTA AGAACTTCGA TACCTTCTAC TCTTATAATG CTTCAGAGAA CTATGCGTTA GCCATTGCCC ACCTGTCTGA TTTGATCACT AAAGAGGACA GCAGCAAGAC CGACTTCATC ACCGCTTGGC CGACCGATGA CCCAGGCATC AGCCGTCAGC AAGCCAAAGA CATTCAGCAA GCACTGCTTA ATGCCGGTTA TGACATTGGA GAGGTTGATG GCATCATCGG TGATAACACC CGTCTGGCCA TTCAGCAATA TCAGACCAGT AAAGGCGTAT TCCCTGCCGA TGGCCGTGCC GGTCAGAAGT TCTATCGCTT GATTATGGGC AATACTGGAG GTAGCGCCAA TAACCCACGT CCGGCGTCAA CCTATGCCTC ATCCTCTTAT CCGGCGCAGC CAAGCCAAGC GCCTAGTGCG ACCAATGACA GCATCACCCG CTTAATTGAG CAGCAAGATG GCTATCGCCG TGAGATTCAA AGTGATGGCA CCATCCGTTT AATTCGAGTC GATAAAGGTC AATAA
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Protein sequence | MLRTPLAATL TTALGISLAA TSAHAAKPPA PNLSNAEFQQ CLSGLKNSST FRGVSSSTFE NYRPSEPDPS VIASLNYQPE FQKDVWDYLS SLVDKERVED GIRAKHEMAD TLRRIEARYG VTPEHVLGVW GVESNFGQTL GKKDLFQSLA TLSCFDRRQS YFRGEYANAL KIVQQGDIRP QDMTGSWAGA FGQTQFMPGT FLDLAVDFDG DGRRDLVNSK ADALASTANF LAKRGYRSGE PWGYEVKIPQ GFWGSNSRKD KKSMSYWRDK GFTLADGRPL PYDLSSAGLL LPAGLNGPAF LVGKNFDTFY SYNASENYAL AIAHLSDLIT KEDSSKTDFI TAWPTDDPGI SRQQAKDIQQ ALLNAGYDIG EVDGIIGDNT RLAIQQYQTS KGVFPADGRA GQKFYRLIMG NTGGSANNPR PASTYASSSY PAQPSQAPSA TNDSITRLIE QQDGYRREIQ SDGTIRLIRV DKGQ
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