Gene PsycPRwf_0286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0286 
Symbol 
ID5206009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp340063 
End bp341487 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content51% 
IMG OID640598496 
Productlytic murein transglycosylase 
Protein accessionYP_001279191 
Protein GI148652098 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02283] lytic murein transglycosylase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGTA CCCCTCTTGC TGCTACCTTG ACCACGGCCC TTGGCATTTC TTTGGCGGCC 
ACCTCAGCAC ACGCCGCCAA GCCACCGGCC CCTAACTTAT CAAATGCTGA ATTTCAACAG
TGCTTAAGTG GCCTAAAAAA CTCAAGTACT TTTCGCGGCG TAAGCAGCTC AACTTTTGAA
AACTATCGCC CCAGCGAGCC AGATCCAAGT GTGATTGCTT CGTTAAACTA TCAACCTGAG
TTTCAAAAAG ATGTGTGGGA TTATCTGTCA TCACTGGTGG ATAAAGAGCG CGTTGAAGAT
GGTATTCGTG CCAAGCATGA GATGGCAGAC ACCTTACGCC GCATTGAGGC GCGTTACGGG
GTAACGCCTG AGCACGTGCT GGGCGTGTGG GGTGTCGAGT CAAACTTCGG TCAAACCTTA
GGCAAAAAAG ATCTGTTCCA GTCATTGGCT ACTTTGTCTT GCTTTGACCG CCGTCAGTCT
TATTTCCGCG GCGAATATGC CAATGCCCTA AAAATCGTAC AACAAGGCGA CATTCGCCCA
CAAGATATGA CAGGCTCTTG GGCAGGCGCT TTTGGTCAGA CTCAGTTTAT GCCCGGTACT
TTCCTTGATT TGGCGGTAGA CTTCGATGGT GATGGCCGCC GAGACTTGGT CAACAGTAAG
GCTGATGCGC TGGCATCAAC TGCCAACTTC TTAGCCAAAC GTGGCTACCG CAGCGGAGAG
CCATGGGGTT ATGAAGTAAA AATTCCACAA GGATTCTGGG GCAGCAATAG CCGCAAAGAC
AAAAAATCTA TGAGCTACTG GCGTGACAAA GGCTTCACGT TAGCCGATGG TCGTCCTCTA
CCTTATGACT TAAGCAGCGC AGGATTACTG TTACCTGCCG GCCTAAATGG CCCTGCCTTC
TTAGTGGGTA AGAACTTCGA TACCTTCTAC TCTTATAATG CTTCAGAGAA CTATGCGTTA
GCCATTGCCC ACCTGTCTGA TTTGATCACT AAAGAGGACA GCAGCAAGAC CGACTTCATC
ACCGCTTGGC CGACCGATGA CCCAGGCATC AGCCGTCAGC AAGCCAAAGA CATTCAGCAA
GCACTGCTTA ATGCCGGTTA TGACATTGGA GAGGTTGATG GCATCATCGG TGATAACACC
CGTCTGGCCA TTCAGCAATA TCAGACCAGT AAAGGCGTAT TCCCTGCCGA TGGCCGTGCC
GGTCAGAAGT TCTATCGCTT GATTATGGGC AATACTGGAG GTAGCGCCAA TAACCCACGT
CCGGCGTCAA CCTATGCCTC ATCCTCTTAT CCGGCGCAGC CAAGCCAAGC GCCTAGTGCG
ACCAATGACA GCATCACCCG CTTAATTGAG CAGCAAGATG GCTATCGCCG TGAGATTCAA
AGTGATGGCA CCATCCGTTT AATTCGAGTC GATAAAGGTC AATAA
 
Protein sequence
MLRTPLAATL TTALGISLAA TSAHAAKPPA PNLSNAEFQQ CLSGLKNSST FRGVSSSTFE 
NYRPSEPDPS VIASLNYQPE FQKDVWDYLS SLVDKERVED GIRAKHEMAD TLRRIEARYG
VTPEHVLGVW GVESNFGQTL GKKDLFQSLA TLSCFDRRQS YFRGEYANAL KIVQQGDIRP
QDMTGSWAGA FGQTQFMPGT FLDLAVDFDG DGRRDLVNSK ADALASTANF LAKRGYRSGE
PWGYEVKIPQ GFWGSNSRKD KKSMSYWRDK GFTLADGRPL PYDLSSAGLL LPAGLNGPAF
LVGKNFDTFY SYNASENYAL AIAHLSDLIT KEDSSKTDFI TAWPTDDPGI SRQQAKDIQQ
ALLNAGYDIG EVDGIIGDNT RLAIQQYQTS KGVFPADGRA GQKFYRLIMG NTGGSANNPR
PASTYASSSY PAQPSQAPSA TNDSITRLIE QQDGYRREIQ SDGTIRLIRV DKGQ